Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02993 ATGGTGAAATTCTTGAAGCCAAACAAAGCCGTCATCGTCCTTCAAGGACGCTATGCCGAGAATAAAGCCGTCATTGTGAAGAATTTCGACGACAGAACCCGTGACCGTGCTTACGGCCATTGTCATGTTGTAGGGATCAAGAAGTATCCAGCTAAGGTTATCAAGAAGGATTCAACGAAGAAAACGTGTGTGAAGGCTTACGTGAAACTCATGAACTACCAGCATCTGATGCAGACTCGTTACACTCTTGATGTTGATTTGAAGGAGGTTGTTACTAGTGATGTTCTTCAGAGTAAGGATAAGAAGGAGACTGCTTTGAAGGAGGCGAACAAGAGGTTCGAGGAGAGGTTTAAGACCGGGAAGAATAGGTGGTTCTTTACCAAGCTCAGGTTTGGATTTATGAACTGGTTTTGTATTCTGGTTAATAGATATGGCGTTACTGTTATCTGTGATGTCAAGTTGTGGAATTTGAACAAATTACGGTTGTCTTGCAATACACTACTAGTACAAAATGTTGTTAAATGGGGTTTTCAGTTGAACGGCGCCAGCAAGAGAAAGAAACGAAGAAGCCGCAACAATGGTGAAATTCTTGAAGCCAAACAAAGCCGTCATCGTCCTTCAAGGACGCTATGCCGAGAAGAAAGCCGTCATGTGAAGAATTTCGACGACGGAACCCGTGACCGTGCTTACGGCCATTGTCTTGTTGCAGGGATCAAGAAGTATCCAGCTAAGGTTATCAAGAAGGATTCAGCGAAGAAAACACGTGTGAAGGCTTACGTGAAACTTGTGAACTACCAGCATCTGACGCCAACTCGTTACACTCTTGATGTTGATTTGAAGGAGGTTGTTACTAGTGATGTTCTTCAGAGTAAGGATAAGAAGGTGACTGTTTTGAAGGAGGCGAACAAGAGGTTCGAGGAGAGGTTTAAGACCGGGAAGAATAGGTGGTTCTTTACCAAGCTCAGGTTTGAATTTATGAACTGGTTTTGGATTCTGGTTAATAGATATGGCGTTACTGTTATCTGTGATGTCAAATTGTGGAATTTGAACAAATCACGGTTGTCTTGCAATACACTACAAGTACAAAATGCTGTTAAATGGTATCATAAAATGGGTCATAGTATTCGTTATTATGGAATGACTTCTCATGTTCTAGGAATCATTTTCTGGGACAGGATTTCCAACCGATACAAGCAGAATGTCGTAATCACATCAATCACCACCAATTGGTTCAATGCTCTTCGAGGCCAACCTCAGCGGGATCTTGAAATGGTCAGAAAGGGGGAGCAGCAGTAG 1296 0.4259 MVKFLKPNKAVIVLQGRYAENKAVIVKNFDDRTRDRAYGHCHVVGIKKYPAKVIKKDSTKKTCVKAYVKLMNYQHLMQTRYTLDVDLKEVVTSDVLQSKDKKETALKEANKRFEERFKTGKNRWFFTKLRFGFMNWFCILVNRYGVTVICDVKLWNLNKLRLSCNTLLVQNVVKWGFQLNGASKRKKRRSRNNGEILEAKQSRHRPSRTLCREESRHVKNFDDGTRDRAYGHCLVAGIKKYPAKVIKKDSAKKTRVKAYVKLVNYQHLTPTRYTLDVDLKEVVTSDVLQSKDKKVTVLKEANKRFEERFKTGKNRWFFTKLRFEFMNWFWILVNRYGVTVICDVKLWNLNKSRLSCNTLQVQNAVKWYHKMGHSIRYYGMTSHVLGIIFWDRISNRYKQNVVITSITTNWFNALRGQPQRDLEMVRKGEQQ 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02993 431 Coils Coil 288 308 - -
Mepo6g02993 431 MobiDBLite consensus disorder prediction 184 209 - -
Mepo6g02993 431 Gene3D - 214 323 IPR038655 -
Mepo6g02993 431 Gene3D - 1 131 IPR038655 -
Mepo6g02993 431 Pfam Ribosomal L27e protein family 245 323 IPR001141 GO:0003735|GO:0005840|GO:0006412
Mepo6g02993 431 Pfam Ribosomal L27e protein family 53 131 IPR001141 GO:0003735|GO:0005840|GO:0006412
Mepo6g02993 431 SUPERFAMILY Translation proteins SH3-like domain 232 323 IPR008991 -
Mepo6g02993 431 MobiDBLite consensus disorder prediction 191 209 - -
Mepo6g02993 431 CDD KOW_RPL27 6 84 IPR041991 -
Mepo6g02993 431 PANTHER 60S RIBOSOMAL PROTEIN L27 1 131 IPR001141 GO:0003735|GO:0005840|GO:0006412
Mepo6g02993 431 FunFam 60S ribosomal protein L27 1 131 - -
Mepo6g02993 431 CDD KOW_RPL27 218 276 IPR041991 -
Mepo6g02993 431 FunFam 60S ribosomal protein L27 213 323 - -
Mepo6g02993 431 SUPERFAMILY Translation proteins SH3-like domain 3 131 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02993 Mepo-Chr6 41448815 41455247 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02993 218 323 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 78.182 1.74e-55 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02993 K02901 - fve:101305387 216.083