Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02974 ATGGATGATGGTAGAGGTCCACCCAAAAGGATCAGAGGAAATGACCAATCTCCTAATAGATTGGCAAGTTCTTCTATTTCTGCCCCTAACGAGGTTGTTATGAGGGGTAATGCAGCATTGCCATCTCAAATTTATTTGCTCAATCAAGTAGGACAACTTGGTAATTCATGGAGTAGGTCAGCATCCAGTACAAATGAAAGTTCATTAGAGAGTGAAAATGGGAGTTTTCAGAGATATCGTCATGACACAATTGGCAATAGGAATGACTTAAGGTTTCATCATCATCGTCCCTCTGTTAATCAACAACACCATGTTAATCATCGTCCAACACTTCCTATGCACGGAGTTCAACCAAATCCTCCACGCGGTGCTACAATCCCTCTACAACCAGACCTTCATATTTTGCAATCTCATGATGTGATGTATGAGAACACTCTCGGACATCAAAGTGTTCATCCCTTTGTATTTGCACAAGATGATGAAAATCTGATTGATCCACATCTAGGAATGCGCTTGGATATTGACGACATGTCCTATGAGGAGTTCATCGCATTGGGTGAGAGGATCGGTAGTGTAAGAATTGGTTTGTCAAAGGAAGTAATTACAACACAGCTGGAGACAAAAAATTACACACCATACCATAATGATATTAATCTGGAGGAGTTGACTTCTGACGACCAAGAAATTGATTCTTGCACAATATGTCAAACTGAATTTGAAGCTCAGGAGAAGATTGGAATCCTACAATGTAAGCATGAATATCATGCCGAGTGCATAAAAAATTGGTTGGTAATAAAAAATGAATGTCCTATTTGTAAATCAGAAGCTTTGACTTCTGCGAAGAATGATGCATAG 855 0.3942 MDDGRGPPKRIRGNDQSPNRLASSSISAPNEVVMRGNAALPSQIYLLNQVGQLGNSWSRSASSTNESSLESENGSFQRYRHDTIGNRNDLRFHHHRPSVNQQHHVNHRPTLPMHGVQPNPPRGATIPLQPDLHILQSHDVMYENTLGHQSVHPFVFAQDDENLIDPHLGMRLDIDDMSYEEFIALGERIGSVRIGLSKEVITTQLETKNYTPYHNDINLEELTSDDQEIDSCTICQTEFEAQEKIGILQCKHEYHAECIKNWLVIKNECPICKSEALTSAKNDA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02974 284 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 196 277 IPR013083 -
Mepo6g02974 284 ProSiteProfiles Zinc finger RING-type profile. 232 273 IPR001841 -
Mepo6g02974 284 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 48 277 IPR045191 GO:0061630
Mepo6g02974 284 Pfam Ring finger domain 230 273 IPR001841 -
Mepo6g02974 284 MobiDBLite consensus disorder prediction 1 28 - -
Mepo6g02974 284 SMART ring_2 232 272 IPR001841 -
Mepo6g02974 284 MobiDBLite consensus disorder prediction 55 77 - -
Mepo6g02974 284 SUPERFAMILY RING/U-box 231 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02974 Mepo-Chr6 41220019 41221920 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02974 153 277 C3H Transcription Factor Family AT2G15530 47.200 1.98e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02974 K19041 - gmx:100800642 221.09