Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02972 ATGGATGATGGTAGAGGTCCACCCAAAAGGATTAGAGGAAATCAACAATCTCCTAATACATTGGCAAGTTCTTCTAATGAGATTGCTATGAGGGATAATGCAACATTGTTATCTCAAATTCATTTGCTCGATCAAGTAGGACAACTTGGTAATTCATGGAGCAGGCCCGGTCAATCAATTATGGTGAATAACGGTAATAACCATTTAGTTCCTGGAAATAATTTGGTGCAGCACTTTTGGCCAACGCCTCATATACAAGCATCCAATACAAATGATACAACTGCAAATAGGAATGGGTTAAGGTTTCCTCATCCTCCTATTAATCAACAACACCATGATAATCATCGTCCAACACTTCCTATGCATGGAGTTCAACCAAATCCTCCACGTGGTGGTGCAATTCCTCTACAACCAGGCCTTCATATTTTGCAATCTCGTGGAATGATGCCAGAGAGGACTCTCAGACATCAAAGTGTTCATCCCTTTGAATCTGCACAAATCGATGATGTCGTTGCTTTAAATGAGGAAGTGCAAAATCGTCTTGACGGTGTTGCTTTAAATGATCAAATGCAAAATCTTCTTAACATTATTGATTTAGATTACGATGAAGTGGAAATTCTGCTTGATCAACATCAAGAAATGCGCTTGGACACGAACAACATGTCTTATGAGGAGTTTATTGCATTGGGTGAGATGATCGGTAGTGTAACTACTGGTTTACCTGAGGAAAGAATTACAGAACAACTAGAGACAGGAGTCTACACCCCATACCCTAATGGTACTAATTTGGAGGAGTTACCTTATAACGACCAAGAAATTGTTGTTTGCACAATATGTCAAGAAAGGGATATCAGTACAGAAGGCGCAGCTAGTGGTTTTCATAGAGGTGAACAGTCAGACACAGTGCAACAACAACAGAAACATGTTGAAGCACCACGTCAATAA 945 0.3989 MDDGRGPPKRIRGNQQSPNTLASSSNEIAMRDNATLLSQIHLLDQVGQLGNSWSRPGQSIMVNNGNNHLVPGNNLVQHFWPTPHIQASNTNDTTANRNGLRFPHPPINQQHHDNHRPTLPMHGVQPNPPRGGAIPLQPGLHILQSRGMMPERTLRHQSVHPFESAQIDDVVALNEEVQNRLDGVALNDQMQNLLNIIDLDYDEVEILLDQHQEMRLDTNNMSYEEFIALGEMIGSVTTGLPEERITEQLETGVYTPYPNGTNLEELPYNDQEIVVCTICQERDISTEGAASGFHRGEQSDTVQQQQKHVEAPRQ 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02972 314 MobiDBLite consensus disorder prediction 296 314 - -
Mepo6g02972 314 MobiDBLite consensus disorder prediction 291 314 - -
Mepo6g02972 314 MobiDBLite consensus disorder prediction 1 25 - -
Mepo6g02972 314 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 41 281 IPR045191 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02972 Mepo-Chr6 41207219 41213329 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02972 187 284 C3H Transcription Factor Family AT2G15530 39.394 3.78e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02972 - K19041 mtr:11405708 196.438