Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02933 ATGGCGACACCGGGAATGGGAATTTTAGACGGCGGAGTACCGACGGCTCAACCACCGGGAACAGACATGACCGGAATATGCTTCAGAGATCAATTATGGCTAAACACATACCCACTCAATCGTAACCTCGTCTTCGATTACTTCGCTTTATCACCTTTCTACGATTGGACTTCTAACAACGAACAACTCCGAATGCGTTCTCATCATCCACTCGATTCCTCTCAACTCACGAAAATGATTGGTATAGAATATGTGTTGAGTGAAGTTATGGAACCTCATCTTTTTATCATGAAGAAGCAGAAGAGGGATAGTCCTGATAAAATTACTCCAATGCTTGCTTATTATATTTTGGATGGTTCTATTTATCAAGCTCCTCAATTATCCAATGTTTTTGCTGCTAGAATTGGATTAATCACTTCTATAGGCTCCAGTTTTTTGGATGATGAAAATGGGAATTGTTCTTTGCATTGGAAGCTGTCATTGAAGCTAAGAAACATAGAAGAAGTATTATTAGGTTCCAATAATGTGATATCTGAGTTTGATAAAGAACTTTTGCAATTATGA 564 0.3848 MATPGMGILDGGVPTAQPPGTDMTGICFRDQLWLNTYPLNRNLVFDYFALSPFYDWTSNNEQLRMRSHHPLDSSQLTKMIGIEYVLSEVMEPHLFIMKKQKRDSPDKITPMLAYYILDGSIYQAPQLSNVFAARIGLITSIGSSFLDDENGNCSLHWKLSLKLRNIEEVLLGSNNVISEFDKELLQL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02933 187 PANTHER MED-6-RELATED 3 141 IPR007018 GO:0003712|GO:0006357|GO:0016592
Mepo6g02933 187 Pfam MED6 mediator sub complex component 26 141 IPR007018 GO:0003712|GO:0006357|GO:0016592
Mepo6g02933 187 Gene3D Mediator complex, subunit Med6 20 147 IPR038566 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02933 Mepo-Chr6 40822143 40824676 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Mepo6g02933 Med6 2.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02933 K15128 - gmx:100792248 235.728