Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02917 ATGTATGTTCTGTTCTATGCAGTGAAATTGCTACAAACAATATCAGACAAGGTAAATAACTTGAATTGGAAGGTTACAAACCGTTCCTGCAACAGTGGTGATAAAGGATTTGGTAACGAGATTATTGTAGAGGATCAAATTGTAAGGAATGTCACATGTGATTGCTCTTTCAACTCTAGCACTGTTTGCCATGTGACAATGATTGATCTCACTAGGAATTATCTAAATGGCTCAATACCAAAGAGTCTTGGACGCCTCTCATCACTAGTAACACTGTCACTTTTGGGAAATAGATTTAGTGGTCAAATTCCCTCAGAAATTGGTGATATTGCCACCTTACAAGAACTGAATGTAGAGGATAATCAACTTGGAGGGAATCTTCCCACAAACCTTGGAAATTTGAAGAACTTGCAGAAATTAATGCTTTCTGCAAATAATTTTACAGGGACAATACCAGAAGCATTTGGCAATCTAAAGAATCTCACGAATTTTAGGATAGATGGAAGCAGTTTATCTGGGAAGATCCCAAGTTTTATCGGAAACTGGACCAAACTTGAAAGATTGGATTTGCAAGGCACGTCCTTGGAAGGTCCGATTCCTCCTGATGTATCTGTCTTGAAAAATTTGAAGGAATTGAGGATATCTGACTTGAAGGGAAACACAACGATGACATTTCCCGATCTGAAGGATTTGAAACGCATGCAAAGACTGGAATTGAGAAATTGCTTAATCACTGGTCCTATTCCAGACTTCATTGGCGAATTGGAAAATTTAAAAACTTTAGATTTGAGCTCCAATAAATTGACTGGTCCAATTCCAGGTTCACTTGAGGACTTAGAAGAAATCAATTTTATGTTTCTGACTAACAACTCTCTGAGTGGAACAATTCCGGGATGGATACTGAGCAACAAACAGAACTTTGATTTATCTTTCAACAATTTTACCGAGTCTTCTGCATCTGATTGCCAGCTCTTGGATGTGAACTTAGCTTCCAGCGTCTCTCCTTCATCAAACACTTCATTATCTTGTTTGAAGGTGGACTTACCTTGTTCGGGAAAACCTCGGTATCATTCACTGTACATAAATTGTGGAGGACCGGCAACTGAGTTTGATGACTATGAATATGAAGCCGACGAACATCTACGTGGAATTTCAAACTTTGTTTCAAGTGGTGATGGAAAATGGGCTTATAGTAGCACCGGAGTATTTCTAGGAAATGAAAAAGCTGATTATGTAGCAAGAAATGTGTTCTCTTTGAATGTTAGCTCTGAATACTACCAAACAGCCCGCATTGCGCCGATATCTCTCAAATACTTTGGATTTTGTATGATGAAGGGAAATTATAAAGTGAAACTTCATTTTGCTGAGATAATGTTTTCTGATGATAAGAAATTCAGCAGCCTTGGAAGGCGCATATTCGATGTATCAGTTCAAGGTCATAAATATTTGAAAGATTTTAACATTATGGAAGAAGCTGGTGGAGTTGGCAAGGGAATCACTAGGGATTTTAATGTTGATGTTAATGATAGCACTTTGGAAATCCACTTATCTTGGGCAGGGAAAGGAACTAATGCCATTCCTATGAGAGGTGTATATGGACCGCTTATATCTGCTATCACTGTCACACCAAACTTTAAAATTCCTTCAAATGGGTTGTCTGCTGGAGCAATTGCTGGAATTGTGGTTGGATCATTGGCATTTATCATGCTGATACTCTTTGTCCTTTGGAAGATGGGTTACCTTTGTGGAAAAGATCAAACAGACAAAGAGCTCCTAGAATTAAAAACAGGCTATTACAGTTTGAGACAAATTAAAACTGCTACTAATAACTTTGATCCACAAAATAAGATAGGTGAAGGAGGATTTGGGCCAGTTTACAAGGGTGTACTGTCAGATGGTGCTGTGATTGCTGTTAAACAGCTATCTTCCAAATCAAAGCAAGGGAACCGTGAATTCGTTAACGAAATAGGCATGATATCTGCTTTGCAGCATCCAAATCTTGTGAAGCTTTACGGATGTTGCATTGAAGGAAACCAATTGTTGCTTGTATATGAATACATGGAGAACAATAGTCTCGCTCGCGCTCTTTTCGGTAAACCAGAACAAAGGTTGAACTTGGACTGGCGTACGAGAATGAAGATCTGTGTCGGGATAGCAAGGGGTTTAGCTTACCTTCATGAGGAATCAAGGTTGAAAATAGTACATAGAGATATTAAAGCAACCAATGTGCTACTCGATAAGAATCTGAATGCAAAGATCTCTGATTTCGGTTTAGCCAAGCTTGATGAAGAAGAAAATACCCATATCAGCACACGAATAGCTGGGACAATAGGTTACATGGCTCCTGAGTATGCTATGCGGGGTTATTTGACCGACAAAGCAGATGTCTATAGCTTTGGGGTTGTTGCTTTAGAGATTGTAAGTGGAATGAGCAACACAAATTATCGGCCAAAAGAGGAGTTTGTTTATCTTCTGGATTGGGCCTATGTTCTCCAAGAACAAGGAAACCTTCTGGAATTGGTGGACCCAAGTCTTGGTTCAAAATACTCCTCAGAAGAGGCCATGAGAATGCTGCAATTGGCACTCCTTTGCACCAATCCATCTCCAACTCTTAGACCACCAATGTCATCTGTAGTAAGCATGCTTGAAGGAAATACTCCGATTCAAGCGCCGATAATCAAACGCAGCGATAGTACAGCTGGCGCAAGATTTAAAGCTTTTGAGCTTCTATCACAAGATAGCCAAACTAATGTTTCTTCAACATTCTTACAAGATAGTAGAGAGCTAAGAGGCAAATCAATGGATGGACCATGGGCTGATTCTTCCATATCTTATCCAAGTAAAGATGAGTATTCTTCAACTGATAAGCTTATTTGA 2877 0.3924 MYVLFYAVKLLQTISDKVNNLNWKVTNRSCNSGDKGFGNEIIVEDQIVRNVTCDCSFNSSTVCHVTMIDLTRNYLNGSIPKSLGRLSSLVTLSLLGNRFSGQIPSEIGDIATLQELNVEDNQLGGNLPTNLGNLKNLQKLMLSANNFTGTIPEAFGNLKNLTNFRIDGSSLSGKIPSFIGNWTKLERLDLQGTSLEGPIPPDVSVLKNLKELRISDLKGNTTMTFPDLKDLKRMQRLELRNCLITGPIPDFIGELENLKTLDLSSNKLTGPIPGSLEDLEEINFMFLTNNSLSGTIPGWILSNKQNFDLSFNNFTESSASDCQLLDVNLASSVSPSSNTSLSCLKVDLPCSGKPRYHSLYINCGGPATEFDDYEYEADEHLRGISNFVSSGDGKWAYSSTGVFLGNEKADYVARNVFSLNVSSEYYQTARIAPISLKYFGFCMMKGNYKVKLHFAEIMFSDDKKFSSLGRRIFDVSVQGHKYLKDFNIMEEAGGVGKGITRDFNVDVNDSTLEIHLSWAGKGTNAIPMRGVYGPLISAITVTPNFKIPSNGLSAGAIAGIVVGSLAFIMLILFVLWKMGYLCGKDQTDKELLELKTGYYSLRQIKTATNNFDPQNKIGEGGFGPVYKGVLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYMENNSLARALFGKPEQRLNLDWRTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGMSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSKYSSEEAMRMLQLALLCTNPSPTLRPPMSSVVSMLEGNTPIQAPIIKRSDSTAGARFKAFELLSQDSQTNVSSTFLQDSRELRGKSMDGPWADSSISYPSKDEYSSTDKLI 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02917 958 SMART serkin_6 611 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02917 958 Gene3D Ribonuclease Inhibitor 8 129 IPR032675 -
Mepo6g02917 958 Pfam Leucine rich repeat 233 292 IPR001611 GO:0005515
Mepo6g02917 958 Pfam Leucine rich repeat 136 195 IPR001611 GO:0005515
Mepo6g02917 958 ProSiteProfiles Leucine-rich repeat profile. 257 280 IPR001611 GO:0005515
Mepo6g02917 958 FunFam Putative LRR receptor-like serine/threonine-protein kinase 687 894 - -
Mepo6g02917 958 SUPERFAMILY Protein kinase-like (PK-like) 595 883 IPR011009 -
Mepo6g02917 958 FunFam Leucine-rich repeat receptor protein kinase EMS1 58 149 - -
Mepo6g02917 958 Gene3D Ribonuclease Inhibitor 222 342 IPR032675 -
Mepo6g02917 958 CDD STKc_IRAK 617 884 - -
Mepo6g02917 958 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 151 218 - -
Mepo6g02917 958 Pfam Malectin domain 359 539 IPR021720 -
Mepo6g02917 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 733 745 IPR008271 GO:0004672|GO:0006468
Mepo6g02917 958 MobiDBLite consensus disorder prediction 920 958 - -
Mepo6g02917 958 Gene3D - 357 544 - -
Mepo6g02917 958 Gene3D Phosphorylase Kinase; domain 1 580 686 - -
Mepo6g02917 958 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 226 317 - -
Mepo6g02917 958 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 356 544 - -
Mepo6g02917 958 Gene3D Transferase(Phosphotransferase) domain 1 687 896 - -
Mepo6g02917 958 Gene3D Ribonuclease Inhibitor 130 221 IPR032675 -
Mepo6g02917 958 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 582 686 - -
Mepo6g02917 958 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 914 - -
Mepo6g02917 958 ProSiteProfiles Protein kinase domain profile. 611 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02917 958 Pfam Protein tyrosine and serine/threonine kinase 614 881 IPR001245 GO:0004672|GO:0006468
Mepo6g02917 958 SUPERFAMILY L domain-like 55 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02917 Mepo-Chr6 40577422 40584271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02917 7 949 Receptor kinase-like Gene Family AT1G53430 61.696 0.0 1183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo6g02917 PK_Tyr_Ser-Thr 4.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02917 - - gmx:121173337 1491.86