LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo6g02910	ATGAAACATGCATGCTGTTTTGGAATATCATTGCTTATTGCCTTTTATGAGAAAGCTCTTGAAGATATAGCCAAATCACTTGGTAAGAAGAATTGGAACTTCGACATAGATCCATGCAGCAACAAACCTAACTGGTTTATAAATGCAGCAAACAAAATCACCTGTAACTGCTCTGTAGCCAGTGACAACTTCTGCCATGTTGTTGAAATAAGTTTCAAAGAGCAAAATCTCGCCGGCACTCTTCCACTGGAATTTAACAGGCTGCGTTACCTTCAAACTATTGACCTCACTCGCAACTACTTGAATGGTTCAATTCCTAAAGAATGGGGCTCCATGATGAATATTAAAAGAATTTCTCTCATAAGCAATCGATTAACGGGTTCAATACCAGTGGAGATTGCAAACCTATCTACTCTCCAAATCTTGGAGTTATGGAACAATCAAATGTCTGGAAATCTTCCTCCCGAGCTTGGGAATCTTACCCAAATTCAAACATTACGAATTTCCTCTAACAATTTTACTGGAGAACTACCTATGACATTGGCCAAGCTCACTGCATTGCAAGATTTCCGAATTGAGGACAACCAATTCTCTGGAAAGATACCTGATTATATTCAGAACTGGACAAGTATCAAAAAACTGATAATTAGTGATTTGAAGGGATCTGAACATGCACCTTTGCCACAACTAAATAATATGATATCGTTAGAAACTCTATTTTTAACCGGAAACAATCTCACTGGACAAGTGCCTTCATGGAGAAAGAATGTCCACATAGGAACAGTTTCGTGTTTGAGCTTTGAATGTCGCAAACATTCATCTGGATCAGCTAAATTTCATGGCAGTCCAACAGGAAATTGGGCATTTAGTACCACTGGTATATTCATCGATGGTGGTCAACTTGGAAAAATTTACTTCCCTCAACATTACCCCCCTCAAAATGTCACTAAGCTTACTATGGTGGATGCTGAACTGTACATGGATGCACGTGTTTCTCCTATTTCTTTGACTTATTATGGGTTTTGCTTGGCAAATGGAAGCTACACAGTAAATCTACATTTTGCTGAAATAATGTTCACAGACGATCAAACTTATGCTAGTCTTGGAAGGCGTTTATTTGATATCTACCTTCAGGGACAGCAGGTGCAAAAGGACTTTAATATTGCAGAAGAAGCAGGGGGAGTTGGTAAGAAAGTCGTACGACAGTTCAATGTTGATGTTACTAGTAATACCTTGGAGATCCGCTTGTATTGGGCTGGAAAAGGGACACAGTATCTCCCAAATAGATCAGTATATGGTCCTCTTATATCAGCTATATCTGTGAAATCCGGCTCTCATTCTGGAAGCATATCTGCAGGAGATGTGGTTGGAATTGTGATTGCAGCAACAATTGTTATCATTCTTATATTTGGTATACTTTGGTGGAAAGGATGTTTTGGAAAGAAAAATTCTTTAACAAGAGAGATAAATAGTTTGGAGCTACAGACGGGCTTATTTACTTTGAGACAAATCAAAGAAGCGACAAATAACTTTGATATTTCCAATAAGATTGGCGAAGGTGGATTTGGTCCTGTGTACAAGGGATGTTTACCCAATGGGACATTGATAGCAGTCAAACAACTTTCTTCTAATTCAAGGCAAGGGAATCGTGAGTTTTTAAACGAGATAGGCATGATTTCTGCTTTGCAACACCCTTATCTTGTTAAACTACGTGGTTGCTGTGTGGAGGGAGATCAGTTGTTGCTGATATATGAATACTTAGAAAACAATAGTCTAGCTCGTGCTCTATTTGGTCCAGAGGAACACCAAATAAGATTAGATTGGTCAACAAGAAAGAAAATATGTGTTGGTATTGCTAGAGGTTTGGCATACCTTCATGAAGAATCAATACTGAAGGTTGTTCACAGGGACATCAAGGCCACTAATGTTTTGCTTGATGCAAATCTCGACCCAAAGATATCGGATTTTGGTTTGGCAAAGCTTGAAGAGGAGGACAAAACTCACATTAGCACTAGAATTGCTGGGACCTATGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTGACAGACAAAGCAGATGTTTATAGTTTCGGAATTGTTGCTTTGGAAATTGTTAGTGGAAGGAGCAACAGCATGTATCGGTCAAAGGAGGAAGCATTCTATCTTCTGGAATGGGCACATTTGTTGAAAGAGAGAGGTGACCTAACAGAGTTAGTTGATAGAAGATTAGGTTCAGATTTCAACAGAAAGGAAGCCATGGTGATGATCAATGTGGCTCTCCTATGTACCAATGTCACTTCAAACCTTAGGCCTTCAATGTCGTCCGTTGTAAGTATGCTTGAAGAAAGGACTGTGGTTCCAGAATTTATTTCAGATTCAAATGAAGTAATGGATAAACAGAAGTTGGAAATAATGAGGCAGTATTACTCTCAGATGGAAGAAATTGATGGGCAATGTATTACTTCTTCATCTCCACCAATTGATTCTTCCTAA	2499	0.3882	MKHACCFGISLLIAFYEKALEDIAKSLGKKNWNFDIDPCSNKPNWFINAANKITCNCSVASDNFCHVVEISFKEQNLAGTLPLEFNRLRYLQTIDLTRNYLNGSIPKEWGSMMNIKRISLISNRLTGSIPVEIANLSTLQILELWNNQMSGNLPPELGNLTQIQTLRISSNNFTGELPMTLAKLTALQDFRIEDNQFSGKIPDYIQNWTSIKKLIISDLKGSEHAPLPQLNNMISLETLFLTGNNLTGQVPSWRKNVHIGTVSCLSFECRKHSSGSAKFHGSPTGNWAFSTTGIFIDGGQLGKIYFPQHYPPQNVTKLTMVDAELYMDARVSPISLTYYGFCLANGSYTVNLHFAEIMFTDDQTYASLGRRLFDIYLQGQQVQKDFNIAEEAGGVGKKVVRQFNVDVTSNTLEIRLYWAGKGTQYLPNRSVYGPLISAISVKSGSHSGSISAGDVVGIVIAATIVIILIFGILWWKGCFGKKNSLTREINSLELQTGLFTLRQIKEATNNFDISNKIGEGGFGPVYKGCLPNGTLIAVKQLSSNSRQGNREFLNEIGMISALQHPYLVKLRGCCVEGDQLLLIYEYLENNSLARALFGPEEHQIRLDWSTRKKICVGIARGLAYLHEESILKVVHRDIKATNVLLDANLDPKISDFGLAKLEEEDKTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGRSNSMYRSKEEAFYLLEWAHLLKERGDLTELVDRRLGSDFNRKEAMVMINVALLCTNVTSNLRPSMSSVVSMLEERTVVPEFISDSNEVMDKQKLEIMRQYYSQMEEIDGQCITSSSPPIDSS	832

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo6g02910	832	FunFam	probable LRR receptor-like serine/threonine-protein kinase At1g53430	480	586	-	-
	Mepo6g02910	832	Gene3D	Phosphorylase Kinase; domain 1	478	586	-	-
	Mepo6g02910	832	Gene3D	Transferase(Phosphotransferase) domain 1	587	798	-	-
	Mepo6g02910	832	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	587	794	-	-
	Mepo6g02910	832	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	230	809	-	-
	Mepo6g02910	832	Gene3D	-	276	446	-	-
	Mepo6g02910	832	ProSiteProfiles	Protein kinase domain profile.	511	763	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo6g02910	832	SMART	serkin_6	511	782	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo6g02910	832	SUPERFAMILY	L domain-like	49	256	-	-
	Mepo6g02910	832	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	633	645	IPR008271	GO:0004672\|GO:0006468
	Mepo6g02910	832	CDD	STKc_IRAK	517	784	-	-
	Mepo6g02910	832	SUPERFAMILY	Protein kinase-like (PK-like)	494	793	IPR011009	-
	Mepo6g02910	832	Pfam	Malectin domain	316	439	IPR021720	-
	Mepo6g02910	832	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	255	444	-	-
	Mepo6g02910	832	Pfam	Protein kinase domain	513	720	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo6g02910	832	FunFam	Probable LRR receptor-like serine/threonine-protein kinase RFK1	18	177	-	-
	Mepo6g02910	832	Gene3D	Ribonuclease Inhibitor	179	268	IPR032675	-
	Mepo6g02910	832	Gene3D	Ribonuclease Inhibitor	10	178	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo6g02910	Mepo-Chr6	40504419	40512018	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo6g02910	18	825	Receptor kinase-like Gene Family	AT1G53420	48.030	0.0	800

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Mepo6g02910		Pkinase	6.3e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo6g02910	-		-	gmx:732563	879.011