Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02908 ATGGCCACATCCACTCAATGTTTCTTCCTTTCACTCATTCTCATTTGGTTCATATCTCAAACATCTTTTGGAGCTATTACTATTCACCCCGATGAAAAGAAAGCTCTTGAAGTTATAGCTAAATCACTTGGTAAGAAGGATTGGAACTTCGACGTAGATCCATGCAGCAATAAACCTAACTGGGTTACGCCTCCCATACAGAAAATCGTAGAGAATAATGTCACCTGTGACTGCTCTATTCCTGGTGACAACTTCTGTCATGTTGTTGCAATTGAACTCTCTCGCAATTACTTGAACGGTCCAATTCCTAAAGAATGGGGCTCCATGACAAATCTTCGTGAAATTAGACTCCCCGGAAATGGTTTAACTGGTTCAATACCAAAGGAGATTGCAAACATATCTACTCTCCAGTTTTTGGAGTTAGTTGGCAATCATATGTCTGGAAATATTCCTCCAGAGCTTGGGAATCTAACCCAGATTCGAACACTCCGACTTTCCTCGAATAATTTTACTGGAGAATTACCCATGACATTGGCCAAGCTCATTACATTGCAAGATTTCCGTATTACAGACACTCAATTCTCTGGAAAGATACCTAATTTTATTCAAAACTGGACAAATATCAAGTCACTAACGATACAAGGAAGTGGATTAACTGGGCCGATTCCTTCTGGAATTTCACTTTTGACAAACTTAACGGACTTGAGAATTTGTGATTTGAATGGATCTGAATATGAACCTTTGCCACAACTTAATAATATGAGATCTTTGAAAACACTGATTCTGAGGAACTGCAATATCAACGGAACGCTGCCTGAAAATCTTGGGAATATGGGATTATTAAAACACTTAGACCTCAGCTTTAACAACATAAGTGGAACAATTCCAAGTACTTATGCTGCCATGAACAGTTCAGAATACATATTTTTAACCGGAAACCTTCTCACTGGATCAGTGCCTCCTGCTTTGGGACATAATGCCGATGTAGATCTTTCATACAATAACTTCAGCATCAGCGAGAATCAGAAGTGTCAAGATGAAAAAGTGAACTTGTTTTCTACCTCATGGGCACGCAATGACATAGGAACAGCGTGTTTGAGCATTGAATGTCCCAAACCCTCATACTCCCTTTATATAAATTGTGGTGGAAGGCGAGTGACAATCAACAAAAGAACTTATGATGATGATTCAGATTCTCCTGGACCAGCTAGATTCTATCGCAGTTCAACTGGAAAGTGGGCATTGAGCACCACTGGTATATTCGTTGATAGTGATCAACTTCAGATAAATTATATCCCGAAAAACATCACCAAACTTACTATGGTGGATGATGAATTGTACACGAACGCACGTGTTTCACCTATTTCTTTGACTTATTATGGCTTTTGCCTCGCAAATGGAAGCTACACGGTATATCTACATTTTGTTGAAATAATGTTCACAGACAACGACTCTTATGGTAGTCTTGGACGACGTGTATTTGATATCTACCTTCAGGGGAATCTGGTGCAAAAGGGGTTCAATATTGCAGAAGAAGCAGGAGGAGTTGGTAAGAAAGTCGTAAAACTATTCAAAGATGTCGCTGTTACTAGTAATACCTTGGAGATCCGCTTGTATTGGGCTGGAAAAGGGACACAGTATCTCCCAAATAGATCAGTATATGGTCCTCTTATATCAGCTATATCAATTGAATCTGATTCTCCACCTGGAAGCATATCTATAGGAGTTGTGGTTGGAATTGTGGTTGCAGCAACAATTATAATCATTCTAGTATTTGGTATACTATGGTGGAAAGGATGTTTTGGAAAGAAAAACTCATTAGCAAAAGAGCTGAAGAGTATAGACCTACAAACAAGTTTATTTACCTTAAGACAAATCAAAGCAGCAACAAATAACTTTGATATTTCCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTTTACAAGGGATGTTTACCCAATGGGACATTGATAGCAGTGAAGCAACTTTCTTCAAAATCAAAGCAAGGGAACCGTGAGTTTCTAAACGAGATAGGCATGATTTCTGCTTTGCAACACCCTTATCTTGTTAGACTCCATGGTTGTTGTGTGGAGGGAGATCAGTTGTTGCTGGTATACGAATACTTGGAAAACAATAGTCTTGCCCGTGCTTTATTTGGTCCAGAGGAACACCAAATAAAATTAGATTGGTCAACAAGGAAGAAGATATGTGTTGGTATAGCAAGAGGTTTGTCATACCTCCATGAAGAATCAAGACTAAAGGTTGTTCACAGGGACATTAAAGCCACAAATGTATTACTTGATACAGATCTTGCCCCTAAGATATCTGATTTTGGTTTGGCGAAACTTGACGAGGAGGATAATACTCACATTAGTACTAGAATTGCTGGGACCTATGGATACATGGCTCCTGAATATGCAATGCATGGTTATTTGACAGACAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCTTTGGAAATCATCAGTGGAAGAAGCAACACCATTTATCGGTCAAAGGAAGAAGCATTTTATCTTCTTGATTGGGCACAGATGTTGAAAGAGAAAGGTGACTTGATGGAGCTAGTTGATAGAAGATTAGGTTCAGATTGCAAGAAAAAGGAAGCCATGGTGATGATCAATGTGGCTCTCCTATGCACCAACATCACTTCGAACCTTAGGCCCTCCATGTCGTTAGTTGTAAGTATGCTTGAAGGAAATACTGTGGTTCCAGAATTTGTGCCAGATTCAAGTGAAGTACTGGATGAAAAGAAAATGGAAGCAATGAGGCAGTATTACAATAAGATGGAAGAAAACAATACCAAGATTGGGGTTTGCGATCTTGACCTGGGTTCTCCTCGTCATAGATCTAAGCTCTTGGTGCCTTCTCCAGCTACAATCCTTGATCTGGATGTTGCTGCTGCTCATGAACACGTTGTTACGACTGCTGTAGCACCTAAACTTGCTGATAAGGCTGCTGCCACCTCTAATCTACCTTTAGTGCACAAAAGCAACACATTTGGCAAGCTGCCTGCTAAGTCTCAAGAGGCCATTGCTCTCAACAAAACTAAATCTGTCACTAAGCATAATAGACCTATTCTTAAACCTGTGATCAAGGGACATAATCTCACTCACAAACATGTACATAGGCCTGTTACTACTTCTGGCGCGTCTGAGACTTTGGTGAAAAATATTGATTGGGTCTTTCTAGACAACTCTGACCAAGAAGGGCTTAATAAGGAAGGAGGTAATGTGAATGTGCCTGAGATTGCAGCAATCCAGAAGAGGGGAGACTCTTCAACATTATCTCTTCACAACTCTTTTGAGATTCTTCATGAAGATAGTGTACTTCCTTTAGGGGAGGCAATGTTAGCTGACAAGGATACTAATCACAATTCAACTGTCGATTTGGCTAAAAGTACTGATATTATTGATCAGGTATCCAAGGAGATAGTTCATTTGAATCAAACTGATAACTCTAAGGTTTCTGATGAAGTGAACAATGAACCCTCTGAGTCTGCAGTTTTGATTTCAAATAGACCTAATGTGTTGGCTGATGCGGGGTCTCAGACTTTTGCCACATCAGTCCCACTTTCTCCTGTGCAGTGCAGCATTACTGGGAGGCTGTTATTCCCCGCTACTGATTCAACGCCTATTATTACACCTATTACCTTTTTTGATGAGATTCTAGGTCCTGATAAAGGCAAGATATCAGTTCCCTCTACTGCTAAAAATACTGCTAGAGCTTGTATGAAAAGTGAGAAAATCTTAAGCAAATTCTGGGCAGATGACTTAGATACTGATCAGGCTTCAGACAACACCTTAGAGCTGGACAATTCTGGTAACAAAGCTAAGCACAAGGCTTCTTACAATCTGCAGAGTCCTAGAGCATCGGAATATGAGTGCATTCACACCCGTGCTAAGAGTGGCATATCTAAAGCTTATAAAACATGA 3954 0.3991 MATSTQCFFLSLILIWFISQTSFGAITIHPDEKKALEVIAKSLGKKDWNFDVDPCSNKPNWVTPPIQKIVENNVTCDCSIPGDNFCHVVAIELSRNYLNGPIPKEWGSMTNLREIRLPGNGLTGSIPKEIANISTLQFLELVGNHMSGNIPPELGNLTQIRTLRLSSNNFTGELPMTLAKLITLQDFRITDTQFSGKIPNFIQNWTNIKSLTIQGSGLTGPIPSGISLLTNLTDLRICDLNGSEYEPLPQLNNMRSLKTLILRNCNINGTLPENLGNMGLLKHLDLSFNNISGTIPSTYAAMNSSEYIFLTGNLLTGSVPPALGHNADVDLSYNNFSISENQKCQDEKVNLFSTSWARNDIGTACLSIECPKPSYSLYINCGGRRVTINKRTYDDDSDSPGPARFYRSSTGKWALSTTGIFVDSDQLQINYIPKNITKLTMVDDELYTNARVSPISLTYYGFCLANGSYTVYLHFVEIMFTDNDSYGSLGRRVFDIYLQGNLVQKGFNIAEEAGGVGKKVVKLFKDVAVTSNTLEIRLYWAGKGTQYLPNRSVYGPLISAISIESDSPPGSISIGVVVGIVVAATIIIILVFGILWWKGCFGKKNSLAKELKSIDLQTSLFTLRQIKAATNNFDISNKIGEGGFGPVYKGCLPNGTLIAVKQLSSKSKQGNREFLNEIGMISALQHPYLVRLHGCCVEGDQLLLVYEYLENNSLARALFGPEEHQIKLDWSTRKKICVGIARGLSYLHEESRLKVVHRDIKATNVLLDTDLAPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGVVALEIISGRSNTIYRSKEEAFYLLDWAQMLKEKGDLMELVDRRLGSDCKKKEAMVMINVALLCTNITSNLRPSMSLVVSMLEGNTVVPEFVPDSSEVLDEKKMEAMRQYYNKMEENNTKIGVCDLDLGSPRHRSKLLVPSPATILDLDVAAAHEHVVTTAVAPKLADKAAATSNLPLVHKSNTFGKLPAKSQEAIALNKTKSVTKHNRPILKPVIKGHNLTHKHVHRPVTTSGASETLVKNIDWVFLDNSDQEGLNKEGGNVNVPEIAAIQKRGDSSTLSLHNSFEILHEDSVLPLGEAMLADKDTNHNSTVDLAKSTDIIDQVSKEIVHLNQTDNSKVSDEVNNEPSESAVLISNRPNVLADAGSQTFATSVPLSPVQCSITGRLLFPATDSTPIITPITFFDEILGPDKGKISVPSTAKNTARACMKSEKILSKFWADDLDTDQASDNTLELDNSGNKAKHKASYNLQSPRASEYECIHTRAKSGISKAYKT 1317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02908 1317 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 374 566 - -
Mepo6g02908 1317 SUPERFAMILY Protein kinase-like (PK-like) 616 916 IPR011009 -
Mepo6g02908 1317 Gene3D Phosphorylase Kinase; domain 1 600 708 - -
Mepo6g02908 1317 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 602 708 - -
Mepo6g02908 1317 ProSitePatterns Serine/Threonine protein kinases active-site signature. 755 767 IPR008271 GO:0004672|GO:0006468
Mepo6g02908 1317 Pfam Protein tyrosine and serine/threonine kinase 635 903 IPR001245 GO:0004672|GO:0006468
Mepo6g02908 1317 Gene3D - 374 566 - -
Mepo6g02908 1317 SMART serkin_6 633 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02908 1317 Pfam Malectin domain 376 561 IPR021720 -
Mepo6g02908 1317 Pfam Leucine rich repeat 255 315 IPR001611 GO:0005515
Mepo6g02908 1317 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 175 241 - -
Mepo6g02908 1317 CDD STKc_IRAK 639 906 - -
Mepo6g02908 1317 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 83 174 - -
Mepo6g02908 1317 Gene3D Ribonuclease Inhibitor 241 355 IPR032675 -
Mepo6g02908 1317 Gene3D Transferase(Phosphotransferase) domain 1 709 914 - -
Mepo6g02908 1317 ProSiteProfiles Protein kinase domain profile. 633 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02908 1317 SUPERFAMILY L domain-like 71 323 - -
Mepo6g02908 1317 Gene3D Ribonuclease Inhibitor 28 240 IPR032675 -
Mepo6g02908 1317 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 937 - -
Mepo6g02908 1317 FunFam Putative LRR receptor-like serine/threonine-protein kinase 709 916 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02908 Mepo-Chr6 40466744 40479235 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02908 27 933 Receptor kinase-like Gene Family AT1G53420 54.930 0.0 954
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo6g02908 PK_Tyr_Ser-Thr 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02908 - - gmx:732563 1222.99