Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02904 ATGTATGTATATATAGAGAAAGCTCTTGAAGATATAGCTAAATCACTTGGTAAGGAGGATTGGAACTTCGAAATTGATCCATGCAACAACAATTCTAACTGGGCCACACCTACGCCTCCGAGTCGCAGATTGCAAGTCGTAGTGAACATTGTTTCTTGTAACTGCAGTGTTGCTGGTGACAACTTTTGCCATGTTGTTGAAATAACTTTGAAAGGGCAAAATCTCCCCGGGACTCTCCCACCAGATTTTACCAGGTTGCATTACCTTCAAACTATCGACCTTTCTCGCAATTACTTGAGTGGAACAATTCCAATACAATGGGGCTCCATGATGAATATTATTAAAATGCGATTTTTCTCTAACAATTTTACTGGAGAACTACCTGCGACATTAGCTAAGCTCACTACATTGGAAGATTTAGTGATTCAAGGAAGTGGATTAAGTGGGCCGATTCCTTCTGGAATTTCACTTTTGACAAAGTTAACTGACTTGAGAATTAGCGATTTGATTGGATCTGAATATGCACCTTTGCCACAATTTAATAGTAGGACATTGTTTAAAAATCTGGTTCTGAGGAATTGCAACATCAATGGAACGCTACCTGAAAATCTTGGGAATACGTCAACCTTTGAATACTTAGACCTCAGCTTTAACAAATTAAGTGGAACGATTCCGAGGACCTATGCTGGCATAAACTTTACATACATATTTTTGACTGGAAACCTTCTCACTGGACAAGTTCCTCCTGTTTGGGCGAAGAGTTCAGACGTGAACTTGTTTTCTACTGCATGGGCACACAACGGAAAATTCCAAACCAGTTCATCAGGAAAATGGGCTACCAGCAACACTGGTATATTCATGGATAGTGATCAACTCAGTAAAACTTATTCTACCCGACATACCTCTACACTTACTATGGTCGATGCTGAATTGTACTCGAGTGCACGCGTTTCTCCTACTTCTTTGACTTATTATGGGTTTTGCCTTGCAAATGGAAGTTACACAGTAAATCTACATTTTGCTGAAATAATGTTCACGAACGATCAAACTTATGGTAGTCTTGGAAGGCGTGTATTTGATATCTACCTTCAGGGAAAGCCAGTGAAAAAAGGCTTCAATATTGCAGAAGAAGCAGGAGGGGTTGGAAAGAAAATCATAAAACAGTTCAATGATGTCGTTGTTACTAGTAATACCTTGGAGATCCGTTTGTATTGGGCTGGAAAAGGGACAAAGTCTCTTCCAAATAGATCAGTATATGGTCCTCTTATATCAGCTATATCTGTGGAATCTGACTCTCCATCTGGAAGCATAACTGCAGGAGCTGTGGTTGGAATTGTGTTTGCAGCAATAGTTATCATCATTCTAGTATTTGGTATATTATGGTGGAAAGGATGTTTTGGAAAGAAAAATTATTTAGCAAGAGAGCTAAATAGTTTAGACCTACAGACGGGTATTTTTACCTTAAGACAAATCAAAGCTGCAACAAATAACTTTGATATTTCCAATAAGATTGGTGAAGGAGGATTTGGTCCCGTGTACAAGGGATGTTTACCAAATGGGACATTGGTAGCAGTGAAGCAACTTTCTTCTAAATCAAAGCAAGGGAATCGTGAGTTTTTAAACGAGATAGGCATGATTTCTGCTTTGCAACACCCTTATCTTGTTAAACTTTATGGTTGTTGTGTGGAGGGAGATCAATTGTTGCTGATATATGAATACTTGGAAAACAATAGCCTTGCTCGTGCTTTATTTGGTCCAGCGGAACACCAAATAAAACTAGATTGGTCAGTAAGGCAGAAGATTTGTCTTGGTATTGCTAGAGGTTTGGCATACCTTCATGAAGAATCAAGACTGAAGGTTGTTCACAGAGACATCAAGGCCACTAATGTGTTGCTTGATAAAGATCTTGAGCCAAAGATATCAGATTTTGGTTTGGCGAAACTTGATGAGGAGGACAATACTCACATTAGCACTAAAATTGCTGGCACCTATGGATATATGGCTCCTGAATATGCAATGCATGGGTATTTGACGGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGCCTTAGAAATCGTTAGTGGAAAGAGCAACACCTTGTATCGGTCAAAGGAGCAAGCATTCTATCTTCTTGATTGGGCGCATTTGTTGAAAGAGAGAGGTGACCTGATGGAGCTAGTTGATAGAAGATTAGGTTTAGATTTCGACAAAAATGAAGCTATGGTGATGATCAATGTGGCTCTCCTATGCACCAACGTCACTTCAAACCTTAGGCCCCCTATGTCGTCAGTCGTAAGTATGCTTGAAGGAAGAACTGTGGTTCCAGAATTTGTGCCAGATTCAAGTGAAGTAATGGATAAAAAGAACATGGAAGTATTGAGGCAGTATTACTATCAGATGGAAGAAAATAGTACAAGTAAGTCACAAACACAAAGTCAGAGTTTATTAACTGATGGGACATGGACTGCTACATCTTCATCAGCTGTAGACCTTTATCCTGTCCACCTTGATTCTTCCTATTGGGAGAAAAGAAATTAA 2541 0.3924 MYVYIEKALEDIAKSLGKEDWNFEIDPCNNNSNWATPTPPSRRLQVVVNIVSCNCSVAGDNFCHVVEITLKGQNLPGTLPPDFTRLHYLQTIDLSRNYLSGTIPIQWGSMMNIIKMRFFSNNFTGELPATLAKLTTLEDLVIQGSGLSGPIPSGISLLTKLTDLRISDLIGSEYAPLPQFNSRTLFKNLVLRNCNINGTLPENLGNTSTFEYLDLSFNKLSGTIPRTYAGINFTYIFLTGNLLTGQVPPVWAKSSDVNLFSTAWAHNGKFQTSSSGKWATSNTGIFMDSDQLSKTYSTRHTSTLTMVDAELYSSARVSPTSLTYYGFCLANGSYTVNLHFAEIMFTNDQTYGSLGRRVFDIYLQGKPVKKGFNIAEEAGGVGKKIIKQFNDVVVTSNTLEIRLYWAGKGTKSLPNRSVYGPLISAISVESDSPSGSITAGAVVGIVFAAIVIIILVFGILWWKGCFGKKNYLARELNSLDLQTGIFTLRQIKAATNNFDISNKIGEGGFGPVYKGCLPNGTLVAVKQLSSKSKQGNREFLNEIGMISALQHPYLVKLYGCCVEGDQLLLIYEYLENNSLARALFGPAEHQIKLDWSVRQKICLGIARGLAYLHEESRLKVVHRDIKATNVLLDKDLEPKISDFGLAKLDEEDNTHISTKIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGKSNTLYRSKEQAFYLLDWAHLLKERGDLMELVDRRLGLDFDKNEAMVMINVALLCTNVTSNLRPPMSSVVSMLEGRTVVPEFVPDSSEVMDKKNMEVLRQYYYQMEENSTSKSQTQSQSLLTDGTWTATSSSAVDLYPVHLDSSYWEKRN 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02904 846 Pfam Protein tyrosine and serine/threonine kinase 500 769 IPR001245 GO:0004672|GO:0006468
Mepo6g02904 846 Gene3D Ribonuclease Inhibitor 7 176 IPR032675 -
Mepo6g02904 846 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 258 431 - -
Mepo6g02904 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Mepo6g02904 846 FunFam Putative LRR receptor-like serine/threonine-protein kinase 574 781 - -
Mepo6g02904 846 Gene3D - 258 432 - -
Mepo6g02904 846 SUPERFAMILY Protein kinase-like (PK-like) 480 798 IPR011009 -
Mepo6g02904 846 ProSiteProfiles Protein kinase domain profile. 498 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02904 846 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 467 573 - -
Mepo6g02904 846 CDD STKc_IRAK 504 771 - -
Mepo6g02904 846 Pfam Malectin domain 264 426 IPR021720 -
Mepo6g02904 846 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 114 807 - -
Mepo6g02904 846 Gene3D Transferase(Phosphotransferase) domain 1 574 779 - -
Mepo6g02904 846 SUPERFAMILY L domain-like 41 252 - -
Mepo6g02904 846 Gene3D Ribonuclease Inhibitor 179 257 IPR032675 -
Mepo6g02904 846 SMART serkin_6 498 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02904 846 Gene3D Phosphorylase Kinase; domain 1 467 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02904 Mepo-Chr6 40369354 40377167 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02904 42 813 Receptor kinase-like Gene Family AT1G53420 48.508 0.0 794
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo6g02904 PK_Tyr_Ser-Thr 3.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02904 - - gmx:732563 1007.28