Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02889 ATGATCTCAAAACCAAGAATCTCTACTATCAATGTTGCTATCATAGTAGCATTATTCACAACCAATGTTGTATTATCAGATGACAATACTCCAATTCCTGCTAATAGAGCCCAATTAGATTCATGGTTTAATACCAATGTGGGTCCATTAGCACAAAGAAAAGCCACCTTGGATCCTGCATTGGTAACTGCAGAGGCTGGTGCTAAGGTTATTAAAGTAATGCAAGATGGCAAGGGTGATTTCAAAACCATCACTGATGCCATTAATAGCATTCCAATTGGAAACACTAAACGTGTGATTGTGAAGATTGGTGGTGGAATTTATAACGAGAAAATTAAAATTGAGAGGACAAAACCTTTTGTTACATTGTATGCAGCACCAGGAAATATGCCAAATTTAACCTATGGTGGCACAGCACAAAAATATGGCACAGTTGATAGTGCTACATTGATTGTTGAATCAGATTATTTTGTAGCTGCTAACATCATGCTTTCGAATTCTGCACCAAGACCTGATGGAAGAAAGAAAGGAGAACAGGCAGTTGCATTAAGAATTTCTGGTGACAAAGCAGCATTTTATAATTGCAAGATTTTAGGGTTCCAAGATACAATTTGTGATGATCGGCATAATCATTTTTTCAAAGATTGCTTAATTCAAGGCACGGTCGATTTCATTTTTGGAAGTGGAACATCACTATATTTGAGAAATGAATTGAGAGCGCTTGGTGACGCTGGGCCAACAGTGATAGTAGCACAAGCAAGAAAAAGTGCATCAGATGCTGATTTATACTCATTTGTGCATTGTGATGTTACTGGAACTGGAACTACTACTTTCTTAGCTAGAGCATGGATGACTTATCCTAAAATTATCTTTGCTTACTCAACTATGACCAATGTTGTTCATCCAAAAGGGTGGGATAATGGCATGCACCCTGAATTTGACAAAACATCATACTTTGGAGAATATCAGAACACAGGACCAAAATCAGATCCTAAAGGGCGTGCAAGTATCACAAAGCAACTAAGTGCAGCAGAGGTTAAACCTTTCATTACACTTGGAATGATTCAAGGATCTAAATGGCTCCTTCCTCCTCCAAAAGTCTAA 1104 0.3786 MISKPRISTINVAIIVALFTTNVVLSDDNTPIPANRAQLDSWFNTNVGPLAQRKATLDPALVTAEAGAKVIKVMQDGKGDFKTITDAINSIPIGNTKRVIVKIGGGIYNEKIKIERTKPFVTLYAAPGNMPNLTYGGTAQKYGTVDSATLIVESDYFVAANIMLSNSAPRPDGRKKGEQAVALRISGDKAAFYNCKILGFQDTICDDRHNHFFKDCLIQGTVDFIFGSGTSLYLRNELRALGDAGPTVIVAQARKSASDADLYSFVHCDVTGTGTTTFLARAWMTYPKIIFAYSTMTNVVHPKGWDNGMHPEFDKTSYFGEYQNTGPKSDPKGRASITKQLSAAEVKPFITLGMIQGSKWLLPPPKV 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02889 367 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 64 361 - -
Mepo6g02889 367 ProSitePatterns Pectinesterase signature 2. 218 227 IPR033131 -
Mepo6g02889 367 Gene3D - 66 363 IPR012334 -
Mepo6g02889 367 FunFam Pectinesterase 66 363 - -
Mepo6g02889 367 Pfam Pectinesterase 71 357 IPR000070 GO:0030599|GO:0042545
Mepo6g02889 367 SUPERFAMILY Pectin lyase-like 67 361 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02889 Mepo-Chr6 40140060 40142170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02889 11 367 Carbohydrate Esterase AT1G69940 57.500 1.41e-150 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02889 K01051 - gmx:100786427 567.77