Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02883 ATGATGAATCTTCAAGGCACGCCTTTATCACATGGCTTCCACATGCCTGCGGAATGGGAACCTCACTCACAGTGTTGGATGGGTTGGCCCGAACGCGCTGATAATTGGCGTGACAATGCCGTACATGCTCAACGTGTTTTTGCCAGGGTGGCGGCTGCGATCTCCAGATTTGAGAAAGTAACCGTTTGTGTTAGTTACGCTCAATGGGAGAATGCACGGAGTCAGCTTCCGGATCATGTTAGAGTCGTTGAGATCAGCGCCAATGATTCTTGGTTTCGCGACATGGGACCTACCTTTGTTGTGAAGAGAGAAACGTCGAAATCTGATGATGTTGAGCATAGGATAGCCGGAATCAACTGGACTTTTAATAGTTGGGGAGGCTTAGAAGATGGATGTTACAGTGATTGGAGTCTCGATGCCCTTGTTAAAAAGAAGATTTTGGAAGTTGAGAGGATTCCTAGATTTCCACAATCTATGGTGCTTGAAGGTGGAAGCATCCATGTGGATGGAGAAGGAACATGTATTACCACCGAGGAGTGTCTATTGAACAAGAACAGGAATCCACATTTGAGTAAGAGCCAAATAGAGGACGAACTCAAGGCATATCTTGGAGTCAGGAAGGTTGTATGGTTGCCTCATGGGTTATATGGAGACGATGATACAAATGGTCATATTGATAGCATATGCTGTTTTGTGAGGCCTGGTGTGGTTATTCTGTCTTGGACTGATGATAAAACTGATCCTCAGTATGAAAGATCTGAAGAAGCATACTCTTTGCTTTCAAGTGTAACTGATGCTAATGGTAGAAAATTTGAAATTATTAAACTCCATGTTCCTGGTCCACTATACATGACGGAGAAAGAGGCTGCTGGGGTTTTTCAGGATGATGAGGCCAAGCCAAGACTTCCCGGTACTAGGCTTGCTGCTTCCTATGTAAACTTTTACATTGCAAATGGTGCTATCATTGCTCCACAGTTTGGAGATAAAAAATGGGATGATGAAGCTATCCGGGTTCTGTCTATGGCCTTCCCTCATCATGAAAATCAAAACAACACAACACAACACAACGCAAAATCTTTTTCTCTGCTAAATCTTAACCTTCATTTTTCGGCTATTCGCTTCGAAACGCGGAAGGAAGGAAGGAAGAAAGAAGCTATAGCAGCATCAGCATCAAGATCAACACTTGGTGAAAATTTACACCAGTTCAGGGGAAAGAAGTTAAGCTATTCAACTTCAATGGTGGGGTTCCAGAGTGAACATATTCCTGGAAACAAGTTTAATGGTAATTATAATAATGGTTCCAGAGTTGAACGACTTGTGAGAGGAAGAGAACAAAGAAAAAGCATCAAGGCATCATCTCCTGATACTGTTCTTATTAACAATAATAACAATATTAATAGCAATTATAATAATAATGTTAATAATAACTATAATGATAGTGATAAACATGTGGTTACTAAATCTTTTGAGTATGACCAATGCTTAAAAGAATGTAATGACTCTGGTGCTTCCCATGTTGAACGATTCCTGGAAGGTGCCGCAGCAGCAAAGGCTCTTAGTAATGGATATGAAAGGGAAGATGGAAAACCTGTTAGACAACGGCTTTTGGTTGTGGCTAATAGATTGCCAGTTTCAGCTGTTAGGAAAGGCGAGGATACTTGGTCTCTGGAGATCAGTGCAGGCGGCTTGGTCAGCGCTCTTTTAGGTGTGAAGGATTTTGAAGCGAGGTGGATAGGTTGGGCCGGTGTCAATGTGGCGGATGCGGTTGGACAGAAGACACTCACTGAAGCATTAGCTGAAAAGAGGTGTATCCCAGTATTTCTTACTGAAGAGATTGTTCATCAGTACTATAATGGCTATTGCAATAACATTTTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGATCGTCTAGCGACAACACGTGGATTCCAGTCTCAGTTTGATTCGTATCAGGAGGCAAACCAAATGTTTGCTGATGTTGTAAATCAGGTCTATGAAGAGGGAGATATTGTTTGGTGTCATGATTATCATCTCATGTTTCTACCTCAATGCTTAAAGAAATTTAACAGCAAAATGAAAGTTGGTTGGTTTCTCCATACCCCATTTCCATCTTCTGAAATTCATAGGACACTGCCATCTCGTTCAGAACTCTTGCGTGCGGTTCTTGCTGCTGATTTGGTTGGTTTCCACACATATGATTATGCACGACACTTTGTTAGTGCGTGTACTCGCATTCTTGGACTTGAGGCCACACCAGAAGGGGTTGAGGATCAAGGGAAACTGACTCGAGTTGCTGCGTTTCCAATTGGTATAGACTCGGATCGATTCATACGTGCACTTGACCTTCCTCAAGTCCAAGCTCCATTCAAAGACTTAGTAGAAAGATTTAAAGGCAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATTCCTCAAAAACTTCTTGCTTTTGAAAAATTCTTGGAAGAGAATGAGGATTGGCGAGAAAAGGTCGTTCTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCCGAGTATCAAAAGCTTACAAGCCAAGTTCATGAAATTGTTGGCCGCATCAATGGAAGATTTGGAACACTGACTGCTGTTCCTATACATCACCTGGACCGCACTCTTGACTTTAACGCACTGTGTGCTTTGTACGCTGTTACAGATGTTGCACTTGTCACGTCTTTGAGGGATGGAATGAATCTTGTCAGTTACGAGTTTGTAGCCTGTCAAGAAGAAAAGAAGGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCTGCACAGTCTCTTGGGGCTGGGGCACTTCTGGTCAACCCCTGGAACATCTCAAAAGTTGCTGAAGCAATCGCCAAAGCTCTGAACATGCCATCAGAAGAGAGAGAGAAGCGACATAGGCACAACTTCCATCATGTAACAACCCACACTGCGCAGGAATGGGCAGAAACTTTTGTTAGCGAGCTAAATGATACTGTTGTTGAGGCACAGTTAAGGACAAAACAGGTTCCACCACGGCTCGATACCAGGAAGACAATTCAACAATATCTGAAGTCAACTAATCGATTGCTTATTTTGGGATTCAATGGAACTTTAACTGAGCAAGTTGAGAGGAAAGGTGATCAACTGAAAGAAATGGAACTCTCGGTGCATCCAGAATTGAAACAACCATTGACACAACTTTGCAATGACCCAAATACTACAGTTGTCATTCTTAGTGGAAGTGGTAGAACACTTCTAGATGAAAACTTCAAAGAATATAACACTTGGCTAGCAGCAGAGAATGGGATGTTTTTAAACCCTTCAAATGGAGAATGGATGACTACAATGCCAGAACAACTAAACATGGAATGGGTTGACAGTGTAAAGGATATTTTTGAATACTTCACTGAAAGAACTCCTCGGTCGTATTTTGAAGAAAGGGAAGCTTCCCTTGTATGGAATTACAGACATGCAGATGTTGAGTTTGGAAAACTTCAAGCAAGGGACATGCTCCAACATCTCTGCACAGGTCCAATTTCAAATGCATCAGTTGAAGTTGTTCAAGGGAGCCGATCAGTTGAGGTGCGAGCTGCTGGTGTAACAAAGGGAGCAGCCATTGACCGCATCCTGGGGGAGATTGTTCACAGTAAATCAATGACTACACCAATTGATTATGTTCTATGTATAGGGCATTTTCTGGCAAAGGACGAAGATATATATGACTTTTTTGAGCCAGAGCCTTCTTCTTTTGGTGCAAGTCTTCAGCGAAGTAAGTTATCAGATGCAGCTAAGTTTCCCAATGAGAAGGTATCACCTATGAAGATCCCATCAATTAAAAATGGATTCAAGTCAGCAAATCAAAGCAAGGGACAGCGACCTATCTCAAATTCAGAGAAGAAAACAGCAAATAATGTCAACCGCACGGCGCGTAAGTGTAAATCACCTTTGCCAGAAAAGATCTCTTGGAATGTCCTTGACCTCAAGAAGGAGAATTACTTCTCGTGTGCCGTTGGAAGAACTCAAACAAATGCTCGATTTACACTTCCATCGTCTGATGAGGTTGCTGAATTTCTGAAAAAACTTGCGCCTACATCTTCTCGTAATTAG 4116 0.422 MMNLQGTPLSHGFHMPAEWEPHSQCWMGWPERADNWRDNAVHAQRVFARVAAAISRFEKVTVCVSYAQWENARSQLPDHVRVVEISANDSWFRDMGPTFVVKRETSKSDDVEHRIAGINWTFNSWGGLEDGCYSDWSLDALVKKKILEVERIPRFPQSMVLEGGSIHVDGEGTCITTEECLLNKNRNPHLSKSQIEDELKAYLGVRKVVWLPHGLYGDDDTNGHIDSICCFVRPGVVILSWTDDKTDPQYERSEEAYSLLSSVTDANGRKFEIIKLHVPGPLYMTEKEAAGVFQDDEAKPRLPGTRLAASYVNFYIANGAIIAPQFGDKKWDDEAIRVLSMAFPHHENQNNTTQHNAKSFSLLNLNLHFSAIRFETRKEGRKKEAIAASASRSTLGENLHQFRGKKLSYSTSMVGFQSEHIPGNKFNGNYNNGSRVERLVRGREQRKSIKASSPDTVLINNNNNINSNYNNNVNNNYNDSDKHVVTKSFEYDQCLKECNDSGASHVERFLEGAAAAKALSNGYEREDGKPVRQRLLVVANRLPVSAVRKGEDTWSLEISAGGLVSALLGVKDFEARWIGWAGVNVADAVGQKTLTEALAEKRCIPVFLTEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRGFQSQFDSYQEANQMFADVVNQVYEEGDIVWCHDYHLMFLPQCLKKFNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRAVLAADLVGFHTYDYARHFVSACTRILGLEATPEGVEDQGKLTRVAAFPIGIDSDRFIRALDLPQVQAPFKDLVERFKGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENEDWREKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRTLDFNALCALYAVTDVALVTSLRDGMNLVSYEFVACQEEKKGVLILSEFAGAAQSLGAGALLVNPWNISKVAEAIAKALNMPSEEREKRHRHNFHHVTTHTAQEWAETFVSELNDTVVEAQLRTKQVPPRLDTRKTIQQYLKSTNRLLILGFNGTLTEQVERKGDQLKEMELSVHPELKQPLTQLCNDPNTTVVILSGSGRTLLDENFKEYNTWLAAENGMFLNPSNGEWMTTMPEQLNMEWVDSVKDIFEYFTERTPRSYFEEREASLVWNYRHADVEFGKLQARDMLQHLCTGPISNASVEVVQGSRSVEVRAAGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLAKDEDIYDFFEPEPSSFGASLQRSKLSDAAKFPNEKVSPMKIPSIKNGFKSANQSKGQRPISNSEKKTANNVNRTARKCKSPLPEKISWNVLDLKKENYFSCAVGRTQTNARFTLPSSDEVAEFLKKLAPTSSRN 1371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02883 1371 CDD GT20_TPS 534 999 IPR001830 GO:0003824|GO:0005992
Mepo6g02883 1371 Pfam Porphyromonas-type peptidyl-arginine deiminase 14 347 IPR007466 GO:0004668|GO:0009446
Mepo6g02883 1371 NCBIfam agmatine deiminase 7 347 IPR017754 GO:0009446|GO:0047632
Mepo6g02883 1371 SUPERFAMILY Pentein 2 347 - -
Mepo6g02883 1371 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 534 999 IPR012766 GO:0003825|GO:0005992
Mepo6g02883 1371 Pfam Glycosyltransferase family 20 534 999 IPR001830 GO:0003824|GO:0005992
Mepo6g02883 1371 Gene3D Glycogen Phosphorylase B; 527 780 - -
Mepo6g02883 1371 Gene3D - 3 354 - -
Mepo6g02883 1371 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 526 1365 IPR001830 GO:0003824|GO:0005992
Mepo6g02883 1371 Gene3D - 1034 1215 IPR023214 -
Mepo6g02883 1371 MobiDBLite consensus disorder prediction 1279 1313 - -
Mepo6g02883 1371 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 781 983 - -
Mepo6g02883 1371 NCBIfam trehalose-phosphatase 1030 1247 IPR003337 GO:0003824|GO:0005992
Mepo6g02883 1371 SUPERFAMILY HAD-like 1031 1365 IPR036412 -
Mepo6g02883 1371 CDD HAD_TPP 1032 1249 - -
Mepo6g02883 1371 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 533 1002 - -
Mepo6g02883 1371 MobiDBLite consensus disorder prediction 1283 1313 - -
Mepo6g02883 1371 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 526 780 - -
Mepo6g02883 1371 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 1121 1201 - -
Mepo6g02883 1371 Gene3D Glycogen Phosphorylase B; 781 983 - -
Mepo6g02883 1371 Pfam Trehalose-phosphatase 1037 1257 IPR003337 GO:0003824|GO:0005992
Mepo6g02883 1371 Hamap Agmatine deiminase [aguA]. 6 376 IPR017754 GO:0009446|GO:0047632
Mepo6g02883 1371 Gene3D - 1121 1201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02883 Mepo-Chr6 40044836 40071094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02883 421 1369 Trehalose Biosynthesis Gene Families AT1G78580 72.165 0.0 1392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02883 K16055 - gmx:100789554 1490.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g02883 6 40044836 40071094 Mepo6g02883 6 40044836 40071094 ECH