Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02852 ATGGTGGACACCGTTGTTAGCTTCTTGTTAACCAATTTAACTCAGATTCTTAAGGATGAAGCAAATTTGCTTACTGGTGTTAAGGAAAAAGTCCAGTTGCTCCAACAAGAGTACGTAAGGATAAATGCCTTTCTCCAAGCGTCCGAAGGAAAGCGAGATGAGCATGAAGTAGTGAAAGCTGTGATCAGCCAAATCAGAGACGTGGCCTATGAAGCTCAAGATGTAATTGACAACTATGTTGTTGATGTTTCCCATCACACAAGAAAAGGTATACTGGAAAAATTCTTCCGTAACTTTAAGCATGGAACTATGCTTCATAGTGTCAACAATCAGATCGAGTTGATCAGGGCTAAAATTGTGGATATCTATGAGAACAAAGACAAGTACGACATCAGGGAAGGTGAATCTTCTGCAATAGCAATGGAGGCACTTGCAGTGGCAGAGAGAGTGGAAAGGCGTAGGAGAGATGTCGAGGAGGATGAGGTCGTTGGCTTCGATGGATATGCCACTGAAGTTGCCAATTTGATTGTGAACGACAACACATCACACAAAGTTGTTTCCGTTATTGGTATGGTCGGGTGTGGTAAGACTACCCTTGCACGAAAAATCTACAGAGACCCTCAAATCAGCCACCTCTTTGATTGTTGCGCGTGGGAATTCGTCACTAAAGAGTTCAATACGAAGGAACTTTTACTCAACCTTTTAAGGAGTTTCAAGGCTATACGAGAAGATGAATTGAAACGCGTTAAAAAGGAGAAGAATGAAGAAGAAAGTGAGAGTGCTTCTAAAACTCAAGAGATTGCTATTTTGAAGAACCTCTTGCGGGATTATTTGTCAGACATGAGGTACCTTGTTGTCCTTGATGACATGTGGAGTAGCCAAGTGTTGGAGGAGATAGGAGATGCATTTCCAGATGACAACATGGGAAGCAAGATATTGATCACAAGTCGTTCTGAAGAAGTGGCTTCAAAAATATGTACAATTGAGCCTTACAAGCTTCAACGCCTGAGTGACGAAGACAGTTGGATACTCTTGTCCAAGAAGGTGTTTAGGAGAGAAAAGTGTCCTCCTAATTTGGAAACTGCTGGTAGAAAGATAGCAATTGCATGTAAGGGATTGCCACTCTCCATCGTGGTAATAGCTGGGATCCTACGAAGCAAGGAGAAGTCAGAACGAGTATGGGAAAAAGTGACAAACTACGAAATTCCAGTGAGGCAATTGATACATTTATGGATAGCTGAAGGATTTATAATAGAAACTGGGAACGGGGGTATGATTGAAGAGGATGTTGCTGAAGAATACTTAGAAGAACTCATTCGTCGTAACTTGATTCAAGTGGAGTGTAGAAGGACAGATGGAGGTGTTAAAACATGTAGGATCCATGATCTTCTCCGAGATCTTTGCATGTCTGAGGGCATAAAGGACAATTTTTTTGAAGTTCCCACAGATATCAATATTTTGAAGGAAGGAAAACCAAGCAGACTATCCCTGCATGAAACATTGGACCTCAGGGGTACAATTGCTTTCGACTTGCCTAATGGAATATGGAAGCTTAAGAGATTAAGGCATTTTTATATGGCAAAAGGCATGGACGGAATTCCCAAAATTCCAGGGAAAAAAGTCCTTCCAAATCTCCAAACTCTCTCATTTGTTTCGTTTAACAAAACAACTGTGGAGCAATTAGAAAAAGGTGGTCTTTACTTATCACAAATTGTGACTACTTTTGGAGGTCTTTCCAAACTTCGATACTTGAAAGTTTTAGGAGACGAATCAGGCGACTTTAAGAATTTTAAATTAGAATGTACTGTGTCTGGAAGCTTCCCACAACTGCAAGTACTTAAGATGACAGACCTGAATTTTGTGAGCTGGAATATGGGAGAAAGTGCAATGCCTCAACTTAGACGTTTGGTCATCTACAAGTGTGAATGA 1929 0.4085 MVDTVVSFLLTNLTQILKDEANLLTGVKEKVQLLQQEYVRINAFLQASEGKRDEHEVVKAVISQIRDVAYEAQDVIDNYVVDVSHHTRKGILEKFFRNFKHGTMLHSVNNQIELIRAKIVDIYENKDKYDIREGESSAIAMEALAVAERVERRRRDVEEDEVVGFDGYATEVANLIVNDNTSHKVVSVIGMVGCGKTTLARKIYRDPQISHLFDCCAWEFVTKEFNTKELLLNLLRSFKAIREDELKRVKKEKNEEESESASKTQEIAILKNLLRDYLSDMRYLVVLDDMWSSQVLEEIGDAFPDDNMGSKILITSRSEEVASKICTIEPYKLQRLSDEDSWILLSKKVFRREKCPPNLETAGRKIAIACKGLPLSIVVIAGILRSKEKSERVWEKVTNYEIPVRQLIHLWIAEGFIIETGNGGMIEEDVAEEYLEELIRRNLIQVECRRTDGGVKTCRIHDLLRDLCMSEGIKDNFFEVPTDINILKEGKPSRLSLHETLDLRGTIAFDLPNGIWKLKRLRHFYMAKGMDGIPKIPGKKVLPNLQTLSFVSFNKTTVEQLEKGGLYLSQIVTTFGGLSKLRYLKVLGDESGDFKNFKLECTVSGSFPQLQVLKMTDLNFVSWNMGESAMPQLRRLVIYKCE 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02852 642 Coils Coil 17 37 - -
Mepo6g02852 642 Gene3D - 142 329 IPR027417 -
Mepo6g02852 642 Pfam NB-ARC domain 173 399 IPR002182 GO:0043531
Mepo6g02852 642 Pfam Rx N-terminal domain 5 92 IPR041118 -
Mepo6g02852 642 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 400 IPR027417 -
Mepo6g02852 642 Coils Coil 140 160 - -
Mepo6g02852 642 Gene3D - 402 471 IPR036388 -
Mepo6g02852 642 Gene3D - 335 401 IPR042197 -
Mepo6g02852 642 PRINTS Disease resistance protein signature 370 384 - -
Mepo6g02852 642 PRINTS Disease resistance protein signature 185 200 - -
Mepo6g02852 642 PRINTS Disease resistance protein signature 277 291 - -
Mepo6g02852 642 Coils Coil 239 266 - -
Mepo6g02852 642 CDD RX-CC_like 5 122 IPR038005 -
Mepo6g02852 642 FunFam Probable disease resistance protein At1g61300 145 328 - -
Mepo6g02852 642 Gene3D - 5 113 - -
Mepo6g02852 642 Gene3D Ribonuclease Inhibitor 474 642 IPR032675 -
Mepo6g02852 642 PANTHER DISEASE RESISTANCE PROTEIN RP 399 636 IPR044974 GO:0006952
Mepo6g02852 642 SUPERFAMILY L domain-like 495 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02852 Mepo-Chr6 39602531 39605048 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02852 161 389 WRKY Transcription Factor Family AT5G45050 29.185 1.75e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02852 - - tpra:123896426 744.191