Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02851 ATGCTTTCATTTCTACAAAATCGCTTGGAAGGAAGCATACCATATTCTTTGGGTAGGTTGTCTGGTTTGACATGGCTGTCTCTAAGTGTAAATAATTTGTCAGGTGAAATCCCTCATTCTCTTTACAACCTATCAAATATTAAACTTTTTGATATTGGATTAAACAATTTATTTGGTAGTATTCCATCAAATATAGATCTCCTTTTTCCCAATCTTGAAGAAATCTACATATCAGGTATTCAAATAACTGCACCTTTTCCGTCTTCAATATCCAACCTCACTGGATTGCAATTCGTTGATATGGCACATAATAATTTTAATGCACCAATACCTCTTACTTTAGGTCGATTAAATAAACTTGAGTGGTTTAATATTGGAGGTAATAATCTTGGGAGTGGAGGATCTCACGATTTGGATTTTCTTTCATCGTTAACAAATTGTACCCAATTGTCAACGATCTATCTTTTTGGCAATAATTATGGTGGTGTGTTGCCGAATCTTATAGGAAACTTTTCAACTCATCTTCAAATTCTTCATATGGAGCATAATCAAATATATGGAGTGATCCCGAAAACAATTGAACAACTAATTGGTTTAGTTGTCTTAGAACTTGATCACAATTTCCTTGAGGGAACAATTCCAGATTCAATTGGAAAGCTTAAGAATCTAGAAGGATTGGCCATGGCTGGTAACAAATTCATCGGTAACATTCCATTAATCATTGGCAATCTTACTTTGTTGTATGGAATAAATCTATCTAACAATAAATTAGAAGGAAGCATTCCATTTACCATAAGAAATTGCACCAAATTGCAGAGATTATATTTTGATAGTAACAAATTGAGTGGTGATATACTCAATCAAACATTAGGCTATCTAGATGCTTTAATATTTCTTGACTTGTCCAACAACTTCTTGACCGGCCCCATTCCTTCAGAGTTTGGTAACTTGAAGCAACTTTCTCAATTGAATCTAAGCTTGAATAAGTTGTCTGGTGAAATTCCTAAGGATTTAGCTTCTTGCGTAGCATTGACAGAAGTTTGGTTGGGAGGAAACTTCTTCCATGGAGCTATACCTTTGTTCTTTGGTTCCTCTTTAAGGTCCCTCGAAAAATTAAACCTTTCTGAAAATAATTTCCCAGGCATTATCCCCTCTGGTCTAGAAAATCTAACATATTTGAATAGTTTAGACTTGTCTTTTAACAATCTCTATGGTGAGGTTCCAAAAGGAGGTGTATTTAGCAATGCTTCAGCAATTTTACTAACCGGAAACAAGAACCTTTGTGGAGGAATATCTCAATTCAAGCTTCCTCCATGTTTTAAGGTGCCTTCCAAGAAACATAAAAACCCTTTCAAAAAGAAACTTATCATTGGCAGTGTAGTTGGTGGCGTTTTAATCTCATTTGCAGTTTTGATTATTCTCTATTTTCTCGCGAGAAAGTCCAAACGGCTACCTACTTTACCATCTTTGCAAAATGGGAACTTTAGGGTTACTTATGGTGAGATACATGAAGCCACCAATGGGTTTTCTTCATCCAATTTGGTCGGGGCAGGAAGCTTTGCCTCCGTTTACAAAGGATCTCTCCTTTACTTTGAAAGACCTATTGTTGTAAAGGTGTTGAATCTTCAAGCACATGGAGCTACAAAGAGTTTCACATCTGAATGCAAAGCTTTGGGAAAGATGAAGCACCGAAATCTTGTCAAAATTCTGACATGTTGTTCAAGTGTTGATTATAAGGGTAATGAGTTCAAGGCTATTGTTTTTGAGTTCATGCCTAAGGGGAGTCTAGAAAAGCTTCTGCACGATAACGAAGAGTCTGGAATTCATAATCTCAGCCTCGCACAAAGGGTTGACATTGCTCTTGATGTAGCTCATGCATTGGATTATCTTCACAATAATACTGAGAATGTTGTAGTTCACTGTGATGTTAAACCAAACAATGTTCTTCTTGATGATGACATGGTAGCCCACTTGGGAGACTTTGGATTAGCTAGGTTAATTCATGGAGCCACAACATATTCAACTGTAGATCAAGTCAATTCATCCACAATTAAGGGAACTATAGGATATGTTCCTCCTGAGGAGTATGGAGAGGGTGGCCAAGTATCACCTCATGGCGATATCTGCAGCTACGGAATTCTTCTATTAGAAATGCTCACTGGAAAGAGACCAACAAATAGCATGTTTTCTGGAAGTCTTAGTCTACATGCATTCTGTAAGATGAAAGTTCCAGAAGGAATCTTTGAGATAGTAGATTCACATTTGCTTTTGCCATTTGCTGAAGATGAGACAGGGATTGTGGAAAACAAGATTAGGAATTGTTTAGTAATGTTTGCTATAATTGGAGTTGCATGTTCTGAAGAGTTTCCTGCTCATCGAATGCCGATAAAAGATGTTATATCAAAGTTGAATGAAATCAAATCAATGTTTCCATGCTACGATCCGTTGCTTGTGTTCACAAGAAAGCTTGACTAG 2475 0.3665 MLSFLQNRLEGSIPYSLGRLSGLTWLSLSVNNLSGEIPHSLYNLSNIKLFDIGLNNLFGSIPSNIDLLFPNLEEIYISGIQITAPFPSSISNLTGLQFVDMAHNNFNAPIPLTLGRLNKLEWFNIGGNNLGSGGSHDLDFLSSLTNCTQLSTIYLFGNNYGGVLPNLIGNFSTHLQILHMEHNQIYGVIPKTIEQLIGLVVLELDHNFLEGTIPDSIGKLKNLEGLAMAGNKFIGNIPLIIGNLTLLYGINLSNNKLEGSIPFTIRNCTKLQRLYFDSNKLSGDILNQTLGYLDALIFLDLSNNFLTGPIPSEFGNLKQLSQLNLSLNKLSGEIPKDLASCVALTEVWLGGNFFHGAIPLFFGSSLRSLEKLNLSENNFPGIIPSGLENLTYLNSLDLSFNNLYGEVPKGGVFSNASAILLTGNKNLCGGISQFKLPPCFKVPSKKHKNPFKKKLIIGSVVGGVLISFAVLIILYFLARKSKRLPTLPSLQNGNFRVTYGEIHEATNGFSSSNLVGAGSFASVYKGSLLYFERPIVVKVLNLQAHGATKSFTSECKALGKMKHRNLVKILTCCSSVDYKGNEFKAIVFEFMPKGSLEKLLHDNEESGIHNLSLAQRVDIALDVAHALDYLHNNTENVVVHCDVKPNNVLLDDDMVAHLGDFGLARLIHGATTYSTVDQVNSSTIKGTIGYVPPEEYGEGGQVSPHGDICSYGILLLEMLTGKRPTNSMFSGSLSLHAFCKMKVPEGIFEIVDSHLLLPFAEDETGIVENKIRNCLVMFAIIGVACSEEFPAHRMPIKDVISKLNEIKSMFPCYDPLLVFTRKLD 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02851 824 SUPERFAMILY L domain-like 173 429 - -
Mepo6g02851 824 SMART serkin_6 509 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02851 824 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 591 813 - -
Mepo6g02851 824 PANTHER OS04G0122200 PROTEIN 8 807 - -
Mepo6g02851 824 ProSiteProfiles Protein kinase domain profile. 509 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02851 824 FunFam LRR receptor-like serine/threonine-protein kinase EFR 480 590 - -
Mepo6g02851 824 Gene3D Transferase(Phosphotransferase) domain 1 591 811 - -
Mepo6g02851 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Mepo6g02851 824 SUPERFAMILY Protein kinase-like (PK-like) 484 803 IPR011009 -
Mepo6g02851 824 SMART LRR_typ_2 20 44 IPR003591 -
Mepo6g02851 824 SMART LRR_typ_2 366 389 IPR003591 -
Mepo6g02851 824 SMART LRR_typ_2 390 415 IPR003591 -
Mepo6g02851 824 SMART LRR_typ_2 293 316 IPR003591 -
Mepo6g02851 824 SMART LRR_typ_2 317 341 IPR003591 -
Mepo6g02851 824 SMART LRR_typ_2 196 220 IPR003591 -
Mepo6g02851 824 Gene3D Ribonuclease Inhibitor 1 136 IPR032675 -
Mepo6g02851 824 Pfam Leucine rich repeat 174 233 IPR001611 GO:0005515
Mepo6g02851 824 Pfam Leucine rich repeat 344 403 IPR001611 GO:0005515
Mepo6g02851 824 Pfam Protein kinase domain 511 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02851 824 FunFam LRR receptor-like serine/threonine-protein kinase EFR 136 445 - -
Mepo6g02851 824 Gene3D Ribonuclease Inhibitor 137 448 IPR032675 -
Mepo6g02851 824 Pfam Leucine Rich Repeat 296 317 IPR001611 GO:0005515
Mepo6g02851 824 SUPERFAMILY L domain-like 2 239 - -
Mepo6g02851 824 ProSitePatterns Protein kinases ATP-binding region signature. 515 538 IPR017441 GO:0005524
Mepo6g02851 824 Gene3D Phosphorylase Kinase; domain 1 475 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02851 Mepo-Chr6 39549237 39552104 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02851 2 810 Receptor kinase-like Gene Family AT3G47570 43.431 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo6g02851 Pkinase 5.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02851 - - mtr:25482466 1182.16