Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02841 ATGCCATTTATGAATTACATCGCACAATGGAGAAGCGTAGCAAAAGAAGCCTTAGATCGTTCAGCAATAATCGCAAAATTCCTCTGTTACCTTCACTTCACCGGCAACTACCTCTGTTCACCAACACACGCGTATGGACCTAGTATGCTCCCAACCCTAAATATCGCCGGCGATGTTGTTTTGGTGGAGCATGTTTCTCCGAGGATTGGGAAAGTTGGTCATGGTGATTTGGTTCTTGTGAAGTCACCTTTGAACCCTAATAGGAATTTGACGAAGCGGGTTGTTGCTATGGAAGGGGATACTGTTACTTATTTTGATCCTTTGAATTCTGAGGATTCCAGAATTGCTGTGGTGCCAAAGGGGCATGTTTGGATTCAAGGAGATAACGTCTATGCTTCCCGTGATTCACGTCATTTTGGTCCTGTTCCATATGGTCTTATAAGAGGAAAAGTGTTTTTCCGGGTTTGGCCACCCAGTAGCTTTGGACGGTTAGATAATTGA 501 0.4411 MPFMNYIAQWRSVAKEALDRSAIIAKFLCYLHFTGNYLCSPTHAYGPSMLPTLNIAGDVVLVEHVSPRIGKVGHGDLVLVKSPLNPNRNLTKRVVAMEGDTVTYFDPLNSEDSRIAVVPKGHVWIQGDNVYASRDSRHFGPVPYGLIRGKVFFRVWPPSSFGRLDN 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02841 166 FunFam Inner membrane protease subunit 1 35 163 - -
Mepo6g02841 166 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 8 165 - -
Mepo6g02841 166 Pfam Signal peptidase, peptidase S26 27 104 IPR019533 GO:0004252|GO:0006465
Mepo6g02841 166 Pfam Signal peptidase, peptidase S26 111 156 IPR019533 GO:0004252|GO:0006465
Mepo6g02841 166 CDD S26_SPase_I 46 151 IPR019533 GO:0004252|GO:0006465
Mepo6g02841 166 ProSitePatterns Signal peptidases I signature 3. 123 136 IPR019758 GO:0004252|GO:0016020
Mepo6g02841 166 Gene3D Umud Fragment, subunit A 35 163 - -
Mepo6g02841 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 90 102 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo6g02841 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 118 137 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo6g02841 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 37 53 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo6g02841 166 SUPERFAMILY LexA/Signal peptidase 37 164 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02841 Mepo-Chr6 39408266 39413639 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02841 49 164 MADS-box Gene Family AT1G29960 51.282 4.13e-38 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02841 K09647 - cave:132173278 263.077