Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02770 ATGGTGCAAGGTAAATCTGACACATCTTTTCGTATGCCTCTGGAAAATGTTATGAATGAAGTTCTTAGGCCATCACCTCGCAAATCGATTCCGTACCATCAGCCAGTTTTGGAGCCCGTGAATAATGCCTTAGATATTGAGGCAGTTTCAAGTCATCCCACACAACAAACTTCGTATCTCACAATAGATCCTAAACTGCAACGTGAACTTGACCTTGTTGAGCATTTAGTGATTGTGGGTAAAGATGTAGATGTTCCTTACACGCCTTACCTTACTAAATGTCAGTGGAAGAAAATTGCTAAGGCAGCCATATATAAAACATGTTCTATGGGCCCACCTCCTAGCCCTTCCAAATTAAGTCTTGGAATCTTCTTTGTGAGTTCAATCAATGAAGAAGGTTCAACTCTTTTGAAGTTTACAATTACTCTTTTAGATTCAGATAACAATCTTGTTAACTGGAATCCTTCGGATTCAACTCCATGCAATTGGACTGGTGTGTCTTGCACTGATTCATTGGTAACTTCTGTTAATCTTTACCACCTTAATCTCTCTGGTAGTTTGTCTCCTACTATATGTAATCTTCCATATTTAGTTGAGTTGAATCTTTCAAAAAATTTCATCTCTGGTCCAATTTCTGAACCTTTTTTTGATAACTGTAATAAACTTGAGGTTTTAGACCTTTGTACTAATAGGCTTCATGGACCATTTCTATCTCTTATTTGGAAAATCAAAACACTTAGAAAGCTTTACCTTTGTGAAAATTACATGTATGGTGAAATTCCAAATGAGATTGGAGAACTAACATCACTTGAAGAGTTAGTGATTTATAGCAATAACTTAACCGGAATCATTCCGAAATCAATCAGTAAGTTGAAGAAGCTTAGAGTTATAAGAGCAGGTTTGAATGGTCTCTCAGGAACATTACCTTCAGAAATTAGTGAGTGTGAAAGTTTAGAGACATTAGGGTTAGCACAGAATCAGTTAGTAGGTTCTATTCCAAAAGAGCTTCAAAAGCTTCAGAAACTTACTAATTTGATTCTATGGCAAAACTCTTTTTCTGGTGAACTTCCTCCCGAGATTGGAAACATTAGTAGCCTTGAATTACTTGCCTTGCATCAAAATTCGTTGATTGGTGATTTCCCGAAAGATATCGGAAGGCTATCGCGGTTGAAGAGGTTGTACATGTATACTAATCAGTTGAATGGAACAATTCCACCTGAGTTAGGAAACTGTACTAATGCTGTTGAGATTGATCTTTCTGAAAACCATTTGATTGGTATCATTCCTAAAGAGTTAGGTCAAATCTCCAACCTTACCTTGCTTCACCTATTTGAAAACCAATTGCAGGGTCATATTCCAAAGGAACTTGGAAATTTGAGACTGCTAAGAAATTTAGATTTGTCATTGAATAACTTAACTGGTAGAATTCCATTGGAGTTTCAAAATCTGGTACTCATGGAGGATTTGCAGTTATTTGATAATCAACTTGAAGGTGTGATTCCACCTCGTCTTGGAGCTGTTAAGAACCTTACTATTCTTGATATATCCGAAAATAATCTTGTCGGTACGATACCGATCCATCTTTGTGAATATCAGCAGCTTCAATTCCTTAGCCTTGGATCAAATATGCTCTTTGGAAATATTCCGTATAGCTTGAAAACTTGCAAGTCACTTGTGCAGTTAATGTTGGGAGACAATCTTTTGACAGGAAGTTTACCTGTTGAATTGTATGAACTTCATAATCTTACCGCACTCGAGCTTCATCAAAACCGATTCTCGGGACTTATTAGCCCTGAAATTGGTCAACTTCGGAATTTAGTGAGGCTTCGCTTGTCAGATAATCATTTTTCTGGTTATCTCCCTTCTGAGATTGGAAATTTATCACAACTTGTCACATTTAATGTCTCGTCTAACCGTTTAGGTGGAAGTATTCCCGACGAATTAGGAAACTGTGCGAAGCTGCAGAGGCTTGACCTTAGAGGGAACAAGTTTACTGGTATGCTTCCAAATTCAATTGGAAACCTTGTGAATTTGGAGCTACTAAAAGTTTCTGATAACATGCTTTTTGGAGAAATACCTGGCACTTTGGGAGACCTTATTCGGCTAACTGATTTGGAGCTCGGTGGCAATCGGTTTTCAGGACGCATCTCTTTTCATTTGGGGAGACTCTCTGCTCTTCAAATAGCACTTAACTTGAGTCACAACAATCTTTCTGGTACGATTCCTGATAGCTTAGGGAGCTTGCAAATGCTAGAATCACTTTACTTGAATGATAATCAACTTGTCGGTGAAATTCCTTCATCAATTGGTGAGTTGCCTAGTCTTTTAACATGCAATGTATCTAACAATAAGCTGATAGGAGCTGTTCCTGACACAACTACATTCAGAAAGATGGACTTGACGAATTTTGCTGGGAACAATGGTTTGTGCCGTGTAGGTACTAATCACTGTCATCCATCTTTAGGTTCATCTCATCATGCAAAGCCAGTGAAAGACGGTTTATCAAGGGAAAAGATAGTGAGCATTGTCTCTGGAGTCATTGGTTTTGTTTCTCTTATTTTCATAGTTTGTATATGTTGGACTATGATGAGGCGCCACCGCAGTGACTCTTTTGTTTCGATCGAAGAACAAACAAAGTCTAATGTGTTAGATAACTATTACTTTCCAAAAGAAGGCTTCACTTACAATGATCTCTTGGAAGCTACTGGAAATTTTTCAGAAGGTGAAGTTATAGGAAGAGGAGCTTGTGGAACTGTCTATAAAGCTGTTATGAATGATGGTGAAGTTATTGCTGTCAAGAAGCTGAATACACGAGGCGGAGAAGGAACAAGCATGGACCGAAGCTTCCTTGCGGAGATTTCAACACTTGGAAAGATCAGGCACAGGAACATAGTGAAGCTGCATGGATTTTGTTTTCATGAGGATTCGAATCTTCTATTGTATCAATACATGGAAAATGGAAGCCTTGGAGAAAAACTTCATTCAAGTTCAAAAGAATGTGTATTGGATTGGAATGTTAGATATAAAATAGCTCTAGGAGCAGCAGAAGGATTATGTTATCTTCATTATGATTGTAAACCTCAAATCATTCATCGCGATATTAAGTCGAACAACATTTTGCTTGATCATATGTTTCAGGCTCATGTTGGAGACTTCGGATTAGCAAAGTTGATTGATTTTTCATTATCAAAATCTATGTCTGCTGTTGCTGGATCATATGGCTACATTGCCCCAGAATATGCTTACACAATGAAGGTGACTGAAAAATGTGACATCTATAGTTTTGGGGTAGTTTTGCTGGAACTAGTTACCGGTAGGTCACCGGTTCAACCATTGGAGCAAGGTGGTGATTTAGTGAGTTGGGTGAGGAGATTAATTCAAGCATCCATACCTACATCTGAATTATTTGACAAGAGATTGAATTTGAGTGAACAAAAAACTGTTGAAGAAATGTCTCTTGTTCTAAAAATTGCACTGTTTTGCACAAGTTCATCTCCACTTAATAGGCCTACAATGAGAGAGGTCATTGCAATGTTGATTGATGCTAGGGAATATGTCAACCAATCACCAAACTCTCCCACATCTGAATGTCCACTTGATGAATATAAAAGCTCTTCTTCCAAAGGTTAG 3630 0.3796 MVQGKSDTSFRMPLENVMNEVLRPSPRKSIPYHQPVLEPVNNALDIEAVSSHPTQQTSYLTIDPKLQRELDLVEHLVIVGKDVDVPYTPYLTKCQWKKIAKAAIYKTCSMGPPPSPSKLSLGIFFVSSINEEGSTLLKFTITLLDSDNNLVNWNPSDSTPCNWTGVSCTDSLVTSVNLYHLNLSGSLSPTICNLPYLVELNLSKNFISGPISEPFFDNCNKLEVLDLCTNRLHGPFLSLIWKIKTLRKLYLCENYMYGEIPNEIGELTSLEELVIYSNNLTGIIPKSISKLKKLRVIRAGLNGLSGTLPSEISECESLETLGLAQNQLVGSIPKELQKLQKLTNLILWQNSFSGELPPEIGNISSLELLALHQNSLIGDFPKDIGRLSRLKRLYMYTNQLNGTIPPELGNCTNAVEIDLSENHLIGIIPKELGQISNLTLLHLFENQLQGHIPKELGNLRLLRNLDLSLNNLTGRIPLEFQNLVLMEDLQLFDNQLEGVIPPRLGAVKNLTILDISENNLVGTIPIHLCEYQQLQFLSLGSNMLFGNIPYSLKTCKSLVQLMLGDNLLTGSLPVELYELHNLTALELHQNRFSGLISPEIGQLRNLVRLRLSDNHFSGYLPSEIGNLSQLVTFNVSSNRLGGSIPDELGNCAKLQRLDLRGNKFTGMLPNSIGNLVNLELLKVSDNMLFGEIPGTLGDLIRLTDLELGGNRFSGRISFHLGRLSALQIALNLSHNNLSGTIPDSLGSLQMLESLYLNDNQLVGEIPSSIGELPSLLTCNVSNNKLIGAVPDTTTFRKMDLTNFAGNNGLCRVGTNHCHPSLGSSHHAKPVKDGLSREKIVSIVSGVIGFVSLIFIVCICWTMMRRHRSDSFVSIEEQTKSNVLDNYYFPKEGFTYNDLLEATGNFSEGEVIGRGACGTVYKAVMNDGEVIAVKKLNTRGGEGTSMDRSFLAEISTLGKIRHRNIVKLHGFCFHEDSNLLLYQYMENGSLGEKLHSSSKECVLDWNVRYKIALGAAEGLCYLHYDCKPQIIHRDIKSNNILLDHMFQAHVGDFGLAKLIDFSLSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVSWVRRLIQASIPTSELFDKRLNLSEQKTVEEMSLVLKIALFCTSSSPLNRPTMREVIAMLIDAREYVNQSPNSPTSECPLDEYKSSSSKG 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02770 1209 FunFam Predicted protein 285 380 - -
Mepo6g02770 1209 SUPERFAMILY Protein kinase-like (PK-like) 884 1179 IPR011009 -
Mepo6g02770 1209 Gene3D Transferase(Phosphotransferase) domain 1 984 1198 - -
Mepo6g02770 1209 SMART LRR_typ_2 652 674 IPR003591 -
Mepo6g02770 1209 SMART LRR_typ_2 675 699 IPR003591 -
Mepo6g02770 1209 SMART LRR_typ_2 507 531 IPR003591 -
Mepo6g02770 1209 SMART LRR_typ_2 267 290 IPR003591 -
Mepo6g02770 1209 SMART LRR_typ_2 748 772 IPR003591 -
Mepo6g02770 1209 SMART LRR_typ_2 603 626 IPR003591 -
Mepo6g02770 1209 SMART LRR_typ_2 339 363 IPR003591 -
Mepo6g02770 1209 SMART LRR_typ_2 627 651 IPR003591 -
Mepo6g02770 1209 SMART LRR_typ_2 387 411 IPR003591 -
Mepo6g02770 1209 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 381 483 - -
Mepo6g02770 1209 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 487 1180 - -
Mepo6g02770 1209 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 507 821 - -
Mepo6g02770 1209 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 869 983 - -
Mepo6g02770 1209 SUPERFAMILY L domain-like 552 813 - -
Mepo6g02770 1209 Gene3D Phosphorylase Kinase; domain 1 866 983 - -
Mepo6g02770 1209 Gene3D Ribonuclease Inhibitor 483 823 IPR032675 -
Mepo6g02770 1209 Gene3D Ribonuclease Inhibitor 389 482 IPR032675 -
Mepo6g02770 1209 Gene3D Ribonuclease Inhibitor 130 281 IPR032675 -
Mepo6g02770 1209 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 984 1196 - -
Mepo6g02770 1209 MobiDBLite consensus disorder prediction 1187 1209 - -
Mepo6g02770 1209 Pfam Protein kinase domain 906 1176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02770 1209 FunFam Nuclear pore complex protein NUP107 129 284 - -
Mepo6g02770 1209 Gene3D Ribonuclease Inhibitor 282 383 IPR032675 -
Mepo6g02770 1209 Pfam Leucine rich repeat N-terminal domain 130 168 IPR013210 -
Mepo6g02770 1209 Pfam Leucine Rich Repeat 653 675 IPR001611 GO:0005515
Mepo6g02770 1209 SUPERFAMILY L domain-like 146 496 - -
Mepo6g02770 1209 ProSiteProfiles Protein kinase domain profile. 905 1186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02770 1209 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1029 1041 IPR008271 GO:0004672|GO:0006468
Mepo6g02770 1209 SMART serkin_6 905 1186 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02770 Mepo-Chr6 38062829 38068464 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02770 154 1183 Receptor kinase-like Gene Family AT1G73080 38.241 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo6g02770 Pkinase 2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02770 - - gmx:100818311 1753.03