Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02768 ATGGAAGAACCAACATTTCTATTCCCACCCCCTGATTCCGATCTCGACCTCAGCTTCACCAGCACCACCACTGACCGCACCTTCACCTCTTCAGCACGCACCAGCTTAGCCCGAACAAGCAGCCTTGCTCTCAGCTTCAACGACCGTCTCTCCACCGCCTCCACCGCCGGAGACACTGTCTCCTCCGCCGTCATCCGTCGTCCACACCGGAGCTCAGACCCCAACTGGACAGCAATAAAAGCAGCCACCAATCTCTCCTCCGACGGAAGACTTCATCTCCGTCATTTAAAGCTTATCCGCCACCTTGGCTCCGGTGACCTCGGCCGTGTGTTTCTATGTCGCCTCCGTGACTACGACGGTGCAAATTTTGCACTTAAGGTTGTTGATAAAGATCTTCTTACTCCTAAGAAATTCTCTCACGCGGAAACGGAGGCGGAGATTCTTCACGCGCTGGATCATCCTTTTTTACCAACGCTCTATGCGCGGATCGATGTTTCCCACTACACGTGTCTCCTTATTGACTATTGTCCCGGCGGTGATCTCCACGCTCTTCTACGTAAACAGCCGGGGAACCGACTCACAGTTTCGGCAGCGAGGTTTTTCGCTGCCGAGATACTTGTTGCACTTGAGTATCTTCACGCGCTTGGCGTGGTATACCGTGACTTGAAACCTGAGAATGTACTTCTACGCGAAGATGGACACATCATGCTTTCAGATTTTGACCTCTGTTTTAAATCTGACGTGACACCTACTTTTGAATGTTGCAAAGTTAACAAACACCATGTGGGTCCCACCTACGGTTGTTTCGGTTGTAACGAATCAAGGTCTCGCGATTCGCGAGTAAAAGTCGTTGCCGAGTTTGTTGCAGAACCAACTACGGCATTTTCAAGATCGTGTGTTGGGACACACGAGTATCTAGCGCCAGAGCTTGTTTCGGGTAATGGTCACGGTAATGGCGTGGATTGGTGGGCTTTTGGGGTGTTTATTTACGAGTTGTTATACGGAATGACACCCTTTAAAGGATGTAGTAAGGAGGGCACGCTACGCAATATAGCATCTAACAATGATGTGAAGTTCCACGTGGCGGAGAATGAAGAGGTAGGGATGGTAGAAGCGAGGGATTTAATAGAGAAGTTGTTAGTGAAGGATCCTAAGAAGAGGTTAGGGTGTGTCAGAGGCGCGACCGATGTGAAACGACACCCCTTTTTTGATGGGATTAAGTGGCCTTTGATTAGGACCTATAAGCCACCTGAGGTAAAGGGACTATTGAGGAGGAAAAAATCAGATTTGATTGTAACAAGTAAGAAAATTAGGAAAGGGTGGTGGAAGAGGCTTGGATGTGCATTGAGAAATAAAGGAGCTAGATTTGATTTACTTTCAAACTATAGTAATAATAATCATTATTGTTACGTTAATAATAGTAAGGTTAGGTAA 1434 0.4756 MEEPTFLFPPPDSDLDLSFTSTTTDRTFTSSARTSLARTSSLALSFNDRLSTASTAGDTVSSAVIRRPHRSSDPNWTAIKAATNLSSDGRLHLRHLKLIRHLGSGDLGRVFLCRLRDYDGANFALKVVDKDLLTPKKFSHAETEAEILHALDHPFLPTLYARIDVSHYTCLLIDYCPGGDLHALLRKQPGNRLTVSAARFFAAEILVALEYLHALGVVYRDLKPENVLLREDGHIMLSDFDLCFKSDVTPTFECCKVNKHHVGPTYGCFGCNESRSRDSRVKVVAEFVAEPTTAFSRSCVGTHEYLAPELVSGNGHGNGVDWWAFGVFIYELLYGMTPFKGCSKEGTLRNIASNNDVKFHVAENEEVGMVEARDLIEKLLVKDPKKRLGCVRGATDVKRHPFFDGIKWPLIRTYKPPEVKGLLRRKKSDLIVTSKKIRKGWWKRLGCALRNKGARFDLLSNYSNNNHYCYVNNSKVR 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02768 477 Gene3D Transferase(Phosphotransferase) domain 1 180 249 - -
Mepo6g02768 477 FunFam Serine/threonine-protein kinase OXI1 294 421 - -
Mepo6g02768 477 Gene3D Transferase(Phosphotransferase) domain 1 296 417 - -
Mepo6g02768 477 SMART serkin_6 96 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02768 477 FunFam Serine/threonine-protein kinase OXI1 180 247 - -
Mepo6g02768 477 Pfam Protein kinase domain 98 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02768 477 Gene3D Phosphorylase Kinase; domain 1 95 179 - -
Mepo6g02768 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Mepo6g02768 477 ProSiteProfiles Protein kinase domain profile. 96 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02768 477 CDD STKc_phototropin_like 94 419 - -
Mepo6g02768 477 SUPERFAMILY Protein kinase-like (PK-like) 75 419 IPR011009 -
Mepo6g02768 477 PANTHER FLIPPASE KINASE 1-RELATED 35 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02768 Mepo-Chr6 38040644 38042077 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02768 1 474 AGC Kinase Gene Family AT3G14370 64.344 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mepo6g02768 Pkinase 3.7e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02768 - - lja:Lj0g3v0200189.1 713.375