Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02766 ATGCTTATATTAGTTGGTAACGTGCAAGGAACATCAATGAGTTCTCTTGCTTCACCAATAAGTTTAGGTAGTTCTTCTAGAATGTCACATTCTGTTGTTAGAAGAGTTTCTCTTTCTAGTTCTAGAAGGAATTGTATAGGGAAAAAAAGATGGCATTGTGTTTCTTTGTCTGTTTGTAGATATTCAGTTACTACAACTGATTTTGTTGCTGACCAAGGAAATTCAGTTTCATCACTTGATTCTTCTAACAATGATGATAGTAGTAATAAAGGTGGTGGTGATAGTGGTGGTGGTGTTGGTGGTAGTTTTGTACTTAAACCTCCTCCTAAGCCTGTGTTGAAGTCCAATAATGACTCGATTTTAGTATCGAGTTCGGGTTTAGGGGGTTCGTCGAGGAATAGTGAGGGTGATGATGGTGTGGATGAGAGGAGTAAGGTGATTGAATCACTTGGTGAGGTTTTGGAGAAGGCGGAGAAGTTGGAGAATTCTAAGTTAGGGGGTGAGAGAAGTAATGGTTCGGTTAATAAACCGGCAAGACCAGTTATGAATGATAAACCTAAGGATGATAAACCGGTGATTTCATTACAGAAACATAAGGCAAAGACGTTGAAGAGTATTTGGCGTAAAGGGGATTCGGTTGCGACTGTGCAGAAGGTTGTGAAGGAAGTACCTAAGCCTAGTGTTAAGAGTAGTGAAGTTGGGGAATCTCAAATAGGGGGAAGGGAGAAGGTAACGTCTCAGTTGAGTGATCTTCAGCCTCTTTCGAGACCTCAACCGATGTTACAATCTAGGCCTTCGATTGCCCCGCCGCCACCGCCACCTGTTAAAAAACCCGTTATCTTGAAGGATGATAAAGGTCAAGGTGAAGCACCACCTGTTAAGTCTAAAGAAAGGAAGGGCCCTATCTTGATTGATAAGCATGCTTCAAAGAAACCGGCAGTTGATCCTGCGATTGCTCGAACGGTTTTAGCTCCTACGAAACCAGGGAAGGCCCCTCCCCAAGGAAGGTATAAAGATGATTACCGGAAGAAAGGTGCATCATCTGGGGAAGGAGGACCAAGAAGACGAATGGTGGTGAACAAAGATGGTATTCCTGACGAGGATACTTCGGAACTCAATGGCTCTATTCCCGGCACTGCAAGAAAAGGACGAAAATGGAGTAAAGCAAGTCGTAAGGCGGTACGACTTCAGGCTGCCAGGGATGCTGCTCCTGTAAAGGTTGAAATTCTAGAGGTCAGCGATAGTGGTATGCTGGTGGAGGAGTTGGCGTACAATTTGGCGATTACTGAAGGTGATATCCTCGGCTCTCTGTACTCCAAGGGAGTTAAGCCAGATGGAGTGCAAACTCTAGACAAAGATATGGTGAAGATGATTTGTAAAGATTATGATGTGGAAGTCATAGATGCCGATCCTTTCAAAGTTGAAGGATTAGTGAAGAGAAGGGAAATTCTCGAAGAAGAAGACCTTGACAAACTCAAAGACAGGCCTCCTGTTATTACTATCATGGGCCATGTTGATCACGGCAAGACAACTCTTTTGGATCATATACGAAAGACTAAGGTAGCTGCTTCTGAAGCTGGTGGGATCACACAGGGAATTGGGGCTTATAAAGTGCAAGTACCTGTTGATGGAAAAACGTTGCCGTGTGTTTTTCTCGACACTCCTGGGCACGAGGCATTTGGGGCAATGAGAGCCCGTGGAGCAAGCGTAACAGACATTTGTATTATTGTTGTGGCTGCTGATGATGGTATTCGTCCTCAAACAAATGAAGCTATAGCTCATGCCAAAGCAGCAGGAGTACCCATTATAATTGCTATAAACAAGATAGATAAAGATGGAGCAAATCCAGACCGAGTTATGCAAGAGCTTTCTTCAATTGGTTTGATGCCGGAAGACTGGGGCGGTGACATCCCGATGGTTCAGATAAGTGCTCTTCAAGGGAAAAATGTTGACGATCTTTTGGAAACTGTTATGCTTGTTGCCGAGTTGCAAGAACTGAAAGCTAATCCTGATAGAAGTGCGAAGGGCACAGTCATTGAGGCAGGCATGGATAAATCAAAAGGACCATTTGCCACATTTATTGTGCAGAATGGGTCACTTAGAAGGGGAGATATTGTAGTTTGTGGAGGAGCTTTCGGAAAGGTGCGGGCTTTATTCGATGATGGTGGAAAGCGTGTCGATGTAGCTACACCTTCTATACCTGTACAGGTTATTGGATTGAATAATGTTCCAGTTGCTGGTGATGTATTTGAGGTAGTTGAATCCCTTGATACTGCACGTGAAAAGGCAGAGTCCCGTGTTATGTCATTGCGAGATGAGCGTATTTCAGCAAAGGCAGGAGATGGCAAGGTCACCCTTTCTTCATTAGCTTCTGCAGTTTCGTCAGGAAAGCTTTCTGGACTAGACTTGCACCAACTGAATATTATTTTGAAGGTTGATCTTCAGGGTTCCATTGAAGCCGTCAAACAAGCTCTGCAGGTGCTACCACAAGATAATGTCACACTGAAGTTTTTGATGGAGACAACAGGTGATGTAAGCACAAGTGATGTTGACCTTGCGGCTGCAAGCAAAGCTATTATTTTTGGATTTAATGTCAAAGCACCAGGCTCTGTGAAAAGCTATGCAGATAATAAAGCTGTTGAGATAAGATTATATAGAGTTATTTATGAATTAATTGATGATGTACGAAAAGCAATGGAAGGGCTCCTAGATTCTGTTGAGGACCAAGTACCAATTGGCTCAGCAGAAATACGAGCCATATTCAGCAGTGGTAGCGGTCGTGTTGCCGGATGTATGGTTACAGAGGGAAAGGTTACAAAAGGCTGTGGCATTCGAGTCACGCGGAAGGGAAAAATAGTTCACGTTGGAGTTCTTGATTCTTTGAGACGGGTGAAGGAGATTGTTAAAGAGGTAAATGCTGGTCTTGAGTGTGGACTTGCGTTAGAAGACTATGATGATTGGGAAGAGGGCGACATTCTTGAAGCCTTCAACACAGTTGAGAAGAGAAGAACCCTTGAAGAGGCCTCAGCATCAATGGCAGCTGCTGTGGAGGGAGTAGGATCTTAA 3066 0.4384 MLILVGNVQGTSMSSLASPISLGSSSRMSHSVVRRVSLSSSRRNCIGKKRWHCVSLSVCRYSVTTTDFVADQGNSVSSLDSSNNDDSSNKGGGDSGGGVGGSFVLKPPPKPVLKSNNDSILVSSSGLGGSSRNSEGDDGVDERSKVIESLGEVLEKAEKLENSKLGGERSNGSVNKPARPVMNDKPKDDKPVISLQKHKAKTLKSIWRKGDSVATVQKVVKEVPKPSVKSSEVGESQIGGREKVTSQLSDLQPLSRPQPMLQSRPSIAPPPPPPVKKPVILKDDKGQGEAPPVKSKERKGPILIDKHASKKPAVDPAIARTVLAPTKPGKAPPQGRYKDDYRKKGASSGEGGPRRRMVVNKDGIPDEDTSELNGSIPGTARKGRKWSKASRKAVRLQAARDAAPVKVEILEVSDSGMLVEELAYNLAITEGDILGSLYSKGVKPDGVQTLDKDMVKMICKDYDVEVIDADPFKVEGLVKRREILEEEDLDKLKDRPPVITIMGHVDHGKTTLLDHIRKTKVAASEAGGITQGIGAYKVQVPVDGKTLPCVFLDTPGHEAFGAMRARGASVTDICIIVVAADDGIRPQTNEAIAHAKAAGVPIIIAINKIDKDGANPDRVMQELSSIGLMPEDWGGDIPMVQISALQGKNVDDLLETVMLVAELQELKANPDRSAKGTVIEAGMDKSKGPFATFIVQNGSLRRGDIVVCGGAFGKVRALFDDGGKRVDVATPSIPVQVIGLNNVPVAGDVFEVVESLDTAREKAESRVMSLRDERISAKAGDGKVTLSSLASAVSSGKLSGLDLHQLNIILKVDLQGSIEAVKQALQVLPQDNVTLKFLMETTGDVSTSDVDLAAASKAIIFGFNVKAPGSVKSYADNKAVEIRLYRVIYELIDDVRKAMEGLLDSVEDQVPIGSAEIRAIFSSGSGRVAGCMVTEGKVTKGCGIRVTRKGKIVHVGVLDSLRRVKEIVKEVNAGLECGLALEDYDDWEEGDILEAFNTVEKRRTLEEASASMAAAVEGVGS 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02766 1021 Gene3D - 802 906 IPR036925 -
Mepo6g02766 1021 NCBIfam small GTP-binding protein domain 496 657 IPR005225 GO:0005525
Mepo6g02766 1021 MobiDBLite consensus disorder prediction 333 368 - -
Mepo6g02766 1021 FunFam Translation initiation factor IF-2 670 788 - -
Mepo6g02766 1021 Coils Coil 753 773 - -
Mepo6g02766 1021 Gene3D Translation factors 908 1004 - -
Mepo6g02766 1021 NCBIfam translation initiation factor IF-2 416 1005 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Mepo6g02766 1021 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 801 913 IPR036925 -
Mepo6g02766 1021 CDD IF2_mtIF2_II 674 766 IPR044145 -
Mepo6g02766 1021 Pfam Translation-initiation factor 2 802 895 IPR023115 -
Mepo6g02766 1021 Pfam Elongation factor Tu GTP binding domain 499 659 IPR000795 GO:0003924|GO:0005525
Mepo6g02766 1021 Hamap Translation initiation factor IF-2 [infB]. 7 1003 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Mepo6g02766 1021 MobiDBLite consensus disorder prediction 230 262 - -
Mepo6g02766 1021 CDD mtIF2_IVc 913 995 - -
Mepo6g02766 1021 MobiDBLite consensus disorder prediction 116 132 - -
Mepo6g02766 1021 MobiDBLite consensus disorder prediction 158 195 - -
Mepo6g02766 1021 Gene3D - 491 669 IPR027417 -
Mepo6g02766 1021 MobiDBLite consensus disorder prediction 224 386 - -
Mepo6g02766 1021 MobiDBLite consensus disorder prediction 72 91 - -
Mepo6g02766 1021 PRINTS GTP-binding elongation factor signature 602 611 IPR000795 GO:0003924|GO:0005525
Mepo6g02766 1021 PRINTS GTP-binding elongation factor signature 566 577 IPR000795 GO:0003924|GO:0005525
Mepo6g02766 1021 PRINTS GTP-binding elongation factor signature 498 511 IPR000795 GO:0003924|GO:0005525
Mepo6g02766 1021 PRINTS GTP-binding elongation factor signature 550 560 IPR000795 GO:0003924|GO:0005525
Mepo6g02766 1021 FunFam Translation initiation factor IF-2 802 906 - -
Mepo6g02766 1021 FunFam Translation initiation factor IF-2 491 669 - -
Mepo6g02766 1021 SUPERFAMILY Translation proteins 670 754 IPR009000 -
Mepo6g02766 1021 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 670 IPR027417 -
Mepo6g02766 1021 MobiDBLite consensus disorder prediction 181 195 - -
Mepo6g02766 1021 MobiDBLite consensus disorder prediction 72 143 - -
Mepo6g02766 1021 FunFam Translation initiation factor IF-2 907 1004 - -
Mepo6g02766 1021 MobiDBLite consensus disorder prediction 278 313 - -
Mepo6g02766 1021 SUPERFAMILY Translation proteins 910 1003 IPR009000 -
Mepo6g02766 1021 ProSitePatterns Initiation factor 2 signature. 956 978 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Mepo6g02766 1021 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 494 667 IPR000795 GO:0003924|GO:0005525
Mepo6g02766 1021 CDD IF2_eIF5B 497 663 - -
Mepo6g02766 1021 Gene3D Translation factors 670 786 - -
Mepo6g02766 1021 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 201 1010 IPR015760 -
Mepo6g02766 1021 MobiDBLite consensus disorder prediction 263 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02766 Mepo-Chr6 38004096 38011556 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02766 473 893 Eukaryotic Initiation Factors Gene Family AT1G76810 28.803 2.20e-27 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02766 K02519 - gmx:100818840 1407.51