Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02760 ATGACCTGTTTCCCTTTCTCGTTCAGTAAGACTCCGTCTTCTTCAAGACAACATCCAGACAACGATGAAGATATTTCAGGCATTCATGATGTTAAAATCTATACCTACAAAGAACTAAGGAATGCCACCGATAACTTTAGTCCGGCCAATAAAATCGGAGAAGGTGGTTTTGGTTCTGTCTACATGGGACGACTTAAAGGTGGAAAACTCGCTGCTATAAAAGTTCTTTCAGCTGAATCAAGACAAGGGGTGAAAGAATTCTTGACAGAGATTAATGTGATCTCCGAAGTAGAGCATGAAAATTTGGTTAAATTATATGGTTGTTGTGTTGAAAAAAATAACAGGATATTAGTCTACAATTACCTTGAGAATAACAGTCTTTCACGAACACTTCTAGGCGGAGGTCACAATAGTGATAGTATCTACTTTGATTGGCGAACACGATGTAGAATATGCATTGGCGTTGCACGTGGGCTTGCCTTTCTTCATGAAGAAGTCAGGCCTCCTATCATTCATAGGGATATAAAAGCAAGCAATATTCTCCTTGACAAAGACCTTACACCCAAGATTTCGGATTTTGGTCTTGCAAAGCTTATTCCAGCAAATGCAACTCATGTCAGCACACGTGTAGCAGGAACGCTAGGTTATTTGGCACCGGAGTATGCAATAGGGGGAAGGCTTACACGAAAGGCAGACATTTACAGTTTTGGTGTTCTCCTTGTGGAGATAGTCAGCGGAAGATGTAACACAAATTCGCGACTGCCAATAGAAGAACAATTCATTCTAGAGAGGACATGGGATCTTTACGAGCGAAAGGAATTAGTTGGACTGATAGATACATCGCTAAACGGGGAATTTGATGCCGAGCAGGCATGTAAATTTCTGAAGATTGGCCTTCTTTGCACTCAGGAATCTCCTAAGAGCCGACCGTCCATGTCTACTGTGGTCAAGATGCTAACCGGAGAAATGAAAGTTGACGACAGTATGATGACAAAACCTGCCTTAATTTCTGATTTTATGGACCTCAAAGTTAGACAAAAACAAGAAAGTATAACTGATATGAAGACTTCATCTTCATATAATACATCCTCGGCCTCGGAGCATCAGGACACTACCATTATATCAGCTGCCACTTCAACCTTCACTACACAATATGATCACAGCATGTAA 1170 0.4094 MTCFPFSFSKTPSSSRQHPDNDEDISGIHDVKIYTYKELRNATDNFSPANKIGEGGFGSVYMGRLKGGKLAAIKVLSAESRQGVKEFLTEINVISEVEHENLVKLYGCCVEKNNRILVYNYLENNSLSRTLLGGGHNSDSIYFDWRTRCRICIGVARGLAFLHEEVRPPIIHRDIKASNILLDKDLTPKISDFGLAKLIPANATHVSTRVAGTLGYLAPEYAIGGRLTRKADIYSFGVLLVEIVSGRCNTNSRLPIEEQFILERTWDLYERKELVGLIDTSLNGEFDAEQACKFLKIGLLCTQESPKSRPSMSTVVKMLTGEMKVDDSMMTKPALISDFMDLKVRQKQESITDMKTSSSYNTSSASEHQDTTIISAATSTFTTQYDHSM 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02760 389 MobiDBLite consensus disorder prediction 1 15 - -
Mepo6g02760 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Mepo6g02760 389 Gene3D Phosphorylase Kinase; domain 1 16 121 - -
Mepo6g02760 389 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 31 363 - -
Mepo6g02760 389 MobiDBLite consensus disorder prediction 1 23 - -
Mepo6g02760 389 FunFam cold-responsive protein kinase 1 16 121 - -
Mepo6g02760 389 Pfam Protein kinase domain 49 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02760 389 CDD STKc_IRAK 52 321 - -
Mepo6g02760 389 FunFam cold-responsive protein kinase 1 122 335 - -
Mepo6g02760 389 ProSiteProfiles Protein kinase domain profile. 46 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02760 389 SUPERFAMILY Protein kinase-like (PK-like) 24 319 IPR011009 -
Mepo6g02760 389 SMART serkin_6 46 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02760 389 Gene3D Transferase(Phosphotransferase) domain 1 122 335 - -
Mepo6g02760 389 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Mepo6g02760 389 MobiDBLite consensus disorder prediction 351 371 - -
Mepo6g02760 389 MobiDBLite consensus disorder prediction 350 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02760 Mepo-Chr6 37945366 37948965 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02760 16 380 Receptor kinase-like Gene Family AT1G07650 48.087 8.50e-110 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo6g02760 Pkinase 3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02760 - - gmx:100782320 615.15