Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02759 ATGACCTGTTTTCCTTGCTTATTTAGCAAGACATCGTCTTCTTCAAGAAAAAAACCAGACAATGATGAAGGCATTCACAATGTTAAAATCTATACCTACAAAGAACTAAGTAATGCCACTGATAACTTTAATCCTGCCAAAAAAATTGGAGAGGGTGGTTTTGGTTCTGTCTACATGGGACGACTGAAAAATGGAAAACTTGCTGCTATAAAAGTTCTTTCAGCTGAGTCAAAACAAGGGGTGAAGGAGTTCTTGACAGAGATTAATGTGATCTCCGAAGTAGAGCATGAAAATTTAGTTAAGTTATATGGTGGATGTCACAGTAGTATCTACTTTGATTGGCGAACGCGATGTAGAATATGTGTTGGCATTGCACGTGGGCTTTCCTTTCTACACGAAGAAGTTAGGCCTCCTATCATCCATAGGGATATAAAAGCAAGCAATATTCTCCTTGACAAAGACCTTACACCCAAGATTTCCGATTTTGGTCTTGCAAAGCTTATGCCTGCAAACGCGACTCATGTCAGCACACGTGTAGCAGGAACATTAGGTTATTTGGCACCAGAGTATGCAATGGGAGGAAGACTTACACGAAAAGCAGACATTTACAGTTTCGGTGTCCTCCTTGTAGAGATAGTCAGTGGAAGACGTAACACAAATTCGCAACTGCCAACGGAAGAACAATTCGTTCTAGAGAGGACATGGGAACTATACGAGCGAAAGGAATTAGTAGGACTGATAGATACATCACTAAACGGGGAATTTGATGCCGAGCAGGCCTGCAAGTTTCTGAAGATTGGCCTTCTTTGCACTCAGGAATCTCCAAAGCGCCGGCCATCCATGTCTTCTGTGGTAAAGATGCTTACCGGAGAAATGGAAGTCGACGACAGTATGATGACAAAACCTGCCTTAATTTCTGATCTTATGGACATCAAAGTTACAGAAAAACAAGAAAGTATAATTGATATGAAGACTTCCTACAACACATCCTCTGCCTCAGAGCATGAGGACACTACCATTGCATCAGCAGCAGCTACAACCTTCATTACACAATACATATCAAAACCAACAACATCTGGTGTACCGACGGCCGCCGAGACCTTCGCCACCAAGAACCTGGTCTCCCGTCGCGAACCAGGAGAAGAGGCGAAAAACGGCCAAAAACTGCAAAGCTTTGTCCAAAACGACGGCGACACAAGAGGAGCCACCGGCGACCCAAACGACAGCGCCACCACCTAG 1239 0.4374 MTCFPCLFSKTSSSSRKKPDNDEGIHNVKIYTYKELSNATDNFNPAKKIGEGGFGSVYMGRLKNGKLAAIKVLSAESKQGVKEFLTEINVISEVEHENLVKLYGGCHSSIYFDWRTRCRICVGIARGLSFLHEEVRPPIIHRDIKASNILLDKDLTPKISDFGLAKLMPANATHVSTRVAGTLGYLAPEYAMGGRLTRKADIYSFGVLLVEIVSGRRNTNSQLPTEEQFVLERTWELYERKELVGLIDTSLNGEFDAEQACKFLKIGLLCTQESPKRRPSMSSVVKMLTGEMEVDDSMMTKPALISDLMDIKVTEKQESIIDMKTSYNTSSASEHEDTTIASAAATTFITQYISKPTTSGVPTAAETFATKNLVSRREPGEEAKNGQKLQSFVQNDGDTRGATGDPNDSATT 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02759 412 ProSiteProfiles Protein kinase domain profile. 43 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02759 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Mepo6g02759 412 MobiDBLite consensus disorder prediction 387 412 - -
Mepo6g02759 412 ProSitePatterns Protein kinases ATP-binding region signature. 49 71 IPR017441 GO:0005524
Mepo6g02759 412 MobiDBLite consensus disorder prediction 371 412 - -
Mepo6g02759 412 CDD STKc_IRAK 49 290 - -
Mepo6g02759 412 Gene3D Transferase(Phosphotransferase) domain 1 106 303 - -
Mepo6g02759 412 SMART serkin_6 43 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02759 412 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Mepo6g02759 412 SUPERFAMILY Protein kinase-like (PK-like) 20 288 IPR011009 -
Mepo6g02759 412 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 110 333 - -
Mepo6g02759 412 Pfam Protein kinase domain 45 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02759 412 Pfam Protein kinase domain 119 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02759 412 FunFam cold-responsive protein kinase 1 94 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02759 Mepo-Chr6 37939114 37943486 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02759 16 330 Receptor kinase-like Gene Family AT1G56120 47.246 2.05e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo6g02759 Pkinase 2.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02759 - - gmx:100816707 548.125