Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02720 ATGGCGAAACCTGGTCGAGTTCGTCGCTCACCACCATCAGGTTCCGTCTCCGGATCTTCTTCTCTCTCCTCCTCTTCCCGTTCATCTTCTCGCTCTCGCTCCCGTTCCAGATCCTTCTCTTCCTCTTCTCGCTCTCCTTCCCGCAGCTCCAAGAGCCGTAGCCGTAGTCCTCCTCCTCCCAGACGCAAAAGTTCTACTGAACCAGCTAGGCGAGGTCGATCTCCTCCTCTTCCTCCCCCTCCACAGTCAAAGAGACCTTCTCCTCCCCCAAGGAAACCTTCTCCCGTACGTGAGTCTCTTGTTCTCCACGTTGAGAAACTCAGCAGGAATGTCAATGAAGGTCATTTGAAAGAAATTTTCAGTAATTTTGGTGAGGTTGTAAGTGTGGAGTTGGTGATGGATAGAGCTGTTAATCTTCCAAAAGGATATGGATATGTGCATTTCAAGACAAGAGGAGAAGCTGAAAAAGCATTATTGTACATGGATGGTGCCCAAATAGATGGCAATGTCATTAAGGCAAGATTTACTCTACCTCCAAGACAGAAAGCATCACCACCCCCAAAAGCTGTTGCTCCAAAGAGAGATGCACCCAGGACTGATAATGCTGGTGCAGAAGTTGAAAAAGATGGGCCAAAGCGTCCAAGAGAATCTTCTCCTCGGAGAAAGCCTCCTCCCTCACCACGAAGAAGATCTCCTGTGCCTCGAAGAGCTGGATCTCCAAGACGACCAGATTCTCCTCGCCGCCGTGCAGATTCTCCTGTTCGTCGTCGATTAGACTCTCCTTATCGTCGCGGAGCTGGAGACACACCTCCTAGGAGGAGACCTGTATCTCCCGGAAGAGGTCGTTCTCCATCTCCACCGCCAAGGCGCATTAGATCCCCTGCAAGGGTATCACCTCGAAGGATGCGTGGAAGCCCAGGCCCAGGTCGGAGACGTTCTCCTCCTCCACCTCCAAGACGCCGTTCACCTCCTAGACGAGCTCGTAGTCCTCCTAGAAGATCTCCAGTTGGTCGTAGGCGTAGTCGCTCTCCAATACGTAGATCTGCACGCTCACGCTCAAGATCATTCTCACCTCGCAGAGGTCGACCACCTATGAGACGGGGAAGGTCATCATCTTACTCTGATTCGCCAAGTCCTCGCAAGGTATCCCGGAAATCAAAGAGTCGCAGTCCAAGAAGGCCTTTGAAAGGAAGAGCCAGTAGCAACAGTAGCAGCAGCAGTTCACCACCCCCAGCTCGCAAACCATAG 1248 0.5216 MAKPGRVRRSPPSGSVSGSSSLSSSSRSSSRSRSRSRSFSSSSRSPSRSSKSRSRSPPPPRRKSSTEPARRGRSPPLPPPPQSKRPSPPPRKPSPVRESLVLHVEKLSRNVNEGHLKEIFSNFGEVVSVELVMDRAVNLPKGYGYVHFKTRGEAEKALLYMDGAQIDGNVIKARFTLPPRQKASPPPKAVAPKRDAPRTDNAGAEVEKDGPKRPRESSPRRKPPPSPRRRSPVPRRAGSPRRPDSPRRRADSPVRRRLDSPYRRGAGDTPPRRRPVSPGRGRSPSPPPRRIRSPARVSPRRMRGSPGPGRRRSPPPPPRRRSPPRRARSPPRRSPVGRRRSRSPIRRSARSRSRSFSPRRGRPPMRRGRSSSYSDSPSPRKVSRKSKSRSPRRPLKGRASSNSSSSSSPPPARKP 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02720 415 MobiDBLite consensus disorder prediction 72 95 - -
Mepo6g02720 415 MobiDBLite consensus disorder prediction 240 270 - -
Mepo6g02720 415 CDD RRM_RNPS1 102 174 IPR034201 -
Mepo6g02720 415 PANTHER RIBONUCLEIC ACID BINDING PROTEIN S1 13 266 - -
Mepo6g02720 415 MobiDBLite consensus disorder prediction 176 415 - -
Mepo6g02720 415 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 104 172 IPR000504 GO:0003723
Mepo6g02720 415 FunFam Serine/arginine-rich splicing factor SR45 3 185 - -
Mepo6g02720 415 MobiDBLite consensus disorder prediction 314 366 - -
Mepo6g02720 415 MobiDBLite consensus disorder prediction 12 54 - -
Mepo6g02720 415 Gene3D - 16 185 IPR012677 -
Mepo6g02720 415 MobiDBLite consensus disorder prediction 1 97 - -
Mepo6g02720 415 SMART rrm1_1 101 174 IPR000504 GO:0003723
Mepo6g02720 415 MobiDBLite consensus disorder prediction 395 415 - -
Mepo6g02720 415 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 100 178 IPR000504 GO:0003723
Mepo6g02720 415 SUPERFAMILY RNA-binding domain, RBD 84 185 IPR035979 GO:0003676
Mepo6g02720 415 MobiDBLite consensus disorder prediction 193 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02720 Mepo-Chr6 37532433 37539294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02720 102 175 Eukaryotic Initiation Factors Gene Family AT2G23350 33.784 1.84e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02720 K14325 - gmx:100783566 243.047