Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02687 ATGGGTGCGAACGATGATGATTTCAACATGGATAATCAATATGTTGTAGATGATGATGATGATGATGATGATGTTCCACTTCCTGGATTTAGATTTCATCCCACTGATGAAGAACTTGTTACTTTTTATCTTAGAAGAAAACTTGACAAGAAACCTATTGCTATTGATCTCATCAAACAAATTGATATCTACAAATATGATCCTTGGGATCTTCCAAAAGCAAGTGTTCCTGGAGAAGAGAAGGAGGGTTACTTTTTTTGCCAAAGAGGAAGAAAATATAGGAAGAGCATCAGGCCAAATAGAGTCACTGGCTCTGGATTCTGGAAAGCAACTGGAATAGACAAACCAATATACTCAAATGGAGGAGAAGGAAATGATTGTGTTGGACTCAAAAAAACACTTATTTACTATCGTGGTAGTGCTGGCAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGTCTTCCATCTAATATTCATGCCAAAACAAACATTTCCTATGCTAAGAATGATGCTGATTATGCTCATGAAGCTGAAATTTGGACATTGTGTAGAATTCTCAAAAGAAATGTATCACAAAGGAAACAAATAACGGAGATGAAACAAGTAGCTAACAAGCGTCAAGCTATTCATGAAACAAGCACCGGAATAAACAACAATATGGAGTTTAACACAAATCAAGAAACATATATCAATTTCGGTGCAAACCATGAACAGCATCACATTAATGAGGACAAACCAGTCAATAACTATACAAGCAGTGAACAAAGCAATCAGTTTCATGCAAACAATGTAACACCATCACCAAATATTTGGATTAAGCAGGATGCTAATGAGTTGTTATCATTTGATAATTGGGATGAGCTTGGATCAGTTGTGAGGTTTGCTGTTGATTTGCCTAGTTTGTAA 912 0.3618 MGANDDDFNMDNQYVVDDDDDDDDVPLPGFRFHPTDEELVTFYLRRKLDKKPIAIDLIKQIDIYKYDPWDLPKASVPGEEKEGYFFCQRGRKYRKSIRPNRVTGSGFWKATGIDKPIYSNGGEGNDCVGLKKTLIYYRGSAGKGTKTDWMMHEFRLPSNIHAKTNISYAKNDADYAHEAEIWTLCRILKRNVSQRKQITEMKQVANKRQAIHETSTGINNNMEFNTNQETYINFGANHEQHHINEDKPVNNYTSSEQSNQFHANNVTPSPNIWIKQDANELLSFDNWDELGSVVRFAVDLPSL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02687 303 Pfam No apical meristem (NAM) protein 28 156 IPR003441 GO:0003677|GO:0006355
Mepo6g02687 303 SUPERFAMILY NAC domain 27 189 IPR036093 GO:0003677|GO:0006355
Mepo6g02687 303 MobiDBLite consensus disorder prediction 1 22 - -
Mepo6g02687 303 FunFam NAC domain-containing protein 35 35 193 - -
Mepo6g02687 303 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 25 256 - -
Mepo6g02687 303 Gene3D NAC domain 35 194 IPR036093 GO:0003677|GO:0006355
Mepo6g02687 303 ProSiteProfiles NAC domain profile. 26 190 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02687 Mepo-Chr6 37173110 37175533 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02687 15 200 NAC Transcription Factor Family AT5G39820 54.187 3.52e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo6g02687 NAM 1.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02687 - - gmx:100790471 425.631