Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02686 ATGGGTATGAACGAGGATTTCATCATGGATAATGAATATGTTGCAGAAGATGATAATGTTCCACTTCCTGGATTTCGTTTCCATCCCACTGATGAAGAACTTGTTACTTTTTATCTTAGAAGAAAACTTGACAAGAAACCTATTGCTATTGATCTCATCAAACAAATTGATATCTACAAATATGATCCTTGGGATCTTCCAAAAGCAAATGTACCTGGAGCAGAAAAGGAAGGTTACTTTTTTTGCCAAAGAGGAAGAAAATATAGGAACAGCGTTAGACCAAATAGAGTCACTGGCTCTGGATTCTGGAAAGCAACTGGAATAGACAAACCAATATACTCAAATGGAGGAGAAGGAAATGATTGTGTTGGACTCAAAAAAACACTTGTTTACTATCGTGGTAGTGCTGGCAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGTCTTCCATCTAATATTCATGCCAAAACAAACATTTCCTATGCTAAGAACGATGCTGATTATGCTCATGAAGCTGAAATTTGGACATTGTGTAGAATTTTCAAAAGAAATGTATCACAAAGGAAAAACATGGCAGATGTGAAAGCATTAGCTATCAAGCGTCAAACCATTCATGAAAAGAGTAGTAGAATGAATAGCAATATGGAGTTCAACACAAATCAACAAACATATATTAATTTTGGTAAAAGCGATTACCATCATCACAATGAGGACAAACCAGTCAATAATTATACAAGCAGTGATCAAAGGAATCAATTTCATGTAGACCAGTTGAGCTCTTCAGCGGAACATCAACCTCAACAAATTAATGTAACTGAATCTTCAAATTTTTGGATCAAGCAAGCGGCTAATGAGTTATTATCATTTGATAATTGGAATGAGCTTGGCTCAGTTGTGAACTTTGTTTCGGATTCTCCTAGTTTTTAA 933 0.3558 MGMNEDFIMDNEYVAEDDNVPLPGFRFHPTDEELVTFYLRRKLDKKPIAIDLIKQIDIYKYDPWDLPKANVPGAEKEGYFFCQRGRKYRNSVRPNRVTGSGFWKATGIDKPIYSNGGEGNDCVGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSNIHAKTNISYAKNDADYAHEAEIWTLCRIFKRNVSQRKNMADVKALAIKRQTIHEKSSRMNSNMEFNTNQQTYINFGKSDYHHHNEDKPVNNYTSSDQRNQFHVDQLSSSAEHQPQQINVTESSNFWIKQAANELLSFDNWNELGSVVNFVSDSPSF 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02686 310 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 20 265 - -
Mepo6g02686 310 FunFam NAC domain-containing protein 35 30 188 - -
Mepo6g02686 310 ProSiteProfiles NAC domain profile. 21 185 IPR003441 GO:0003677|GO:0006355
Mepo6g02686 310 Gene3D NAC domain 30 189 IPR036093 GO:0003677|GO:0006355
Mepo6g02686 310 SUPERFAMILY NAC domain 10 185 IPR036093 GO:0003677|GO:0006355
Mepo6g02686 310 Pfam No apical meristem (NAM) protein 23 151 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02686 Mepo-Chr6 37160768 37163041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02686 7 185 NAC Transcription Factor Family AT5G39820 57.292 8.42e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo6g02686 NAM 5e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02686 - - gmx:100790471 446.817