Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02673 ATGAAGGGTGGTGGTAGAAAACAAGGTATAATGTCACCATGTGCTGCATGCAAGCTTCTTAGAAGGAGATGTGCTAAAGATTGTGTGTTTGCACCATATTTTCCAGCTGATGAACCTCACAAGTTTGGCAGTGTCCACAAGGTTTTTGGGGCTAGCAATGTCAACAAAATGTTACAGGAACTACCAGAACATCAACGAAGTGATGCAGTTAGTTCAATGGTATATGAAGCAAATGCAAGAGTAAGGGATCCTGTGTATGGATGTGTGGGAGCCATATCCTCTCTGCAGCATCAAGTAGATGTGCTACAAACCCAATTAGCTCAAGCACAAGCTGAGGTTGTGCATATGAAGATGCACCAATTCTCATCTGATCATCATCAACCACCATCGAATTCGTCACCAACATCAGAAAATGTGTACCAATCAAGCAGGTTCTTTTCTTCACCAAACAAAATGGGACAATCCTTGTGGTCTTACTAG 480 0.4229 MKGGGRKQGIMSPCAACKLLRRRCAKDCVFAPYFPADEPHKFGSVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQHQVDVLQTQLAQAQAEVVHMKMHQFSSDHHQPPSNSSPTSENVYQSSRFFSSPNKMGQSLWSY 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02673 159 Coils Coil 92 112 - -
Mepo6g02673 159 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Mepo6g02673 159 MobiDBLite consensus disorder prediction 118 159 - -
Mepo6g02673 159 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Mepo6g02673 159 MobiDBLite consensus disorder prediction 123 159 - -
Mepo6g02673 159 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02673 Mepo-Chr6 36954193 36959331 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02673 1 120 AS2 family AT1G31320 82.500 1.18e-64 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo6g02673 LOB 4.2e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02673 - - gmx:100803188 256.529