Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02627 ATGGGAGCACTTAGCACATACTTCAACTATAATTGTTACCCTTATCAACCTATTCAAACTACCAACAACAACTCAGAAATCACCACTTTTCAACATCATGAACAAGAACAACTTGTGCAACAAAACCACTATTTCAATGAAGCTTCTCTTTTAGATGAAAGCTTCATTTTTCAAACTCCTAATTGTTTTTACTCAAATGAGACTTACCCTTGTCAAGATCAACTGCTTGTTGACTCCACTTTTTCTTCTCAAAATGATGGCTTCGTTTCGATGAATGAAATTTTCCCAAATGACGAAGATTTCATTTTCAACAACTACCAGCTTCCATGTCCAAAACGCCAAAAGCTGTACTATGAGGAGAAAAGAGAAGAGCCACAACAAGAGCTTTTGAACTCAACCAATTTTTTTGTGGATGATTTTATGACTAACCCTTTTGCTTCCTTTGAGGCAGAAGTAGAACCACCTTTTGCTGCTTCAAAAATTGTTCAATGTGAGAAGCAGGTTACCGAAAGGACTATCTCGTCGCAGAGTATCGCAGCGAGAGAAAGGAGAAGGAAGATAACTGAGAAGACACAAGAGCTAGGGAAGCTGGTTCCTGGTGGACCAAAGATGAACACAGCAGAAATGCTTAATGCTGCTGCTAATTATGTCAAGTTTCTTCAAGCTCAAGTTGGAATGCTTCAACTTATGGAAACATTTAGCAAGGAAGAAAAGGAACCTCCTCCAAGTGAAGATCTACACAAACTAGTTGTTTCTCCATTTGTTCAAGAGAAATTGTATTCAGAAGAAAAGTGCTTTGTTCCAAAAGAGTTTATCACCACATTGACCAATCATAGTGATGTTCAATCAAAACCTACCATCCTTAAGGGTCTGAAACAGCTTGTTGGAACTGAGATTGAGAAGAAACCAAAGCAAGAATAG 921 0.3811 MGALSTYFNYNCYPYQPIQTTNNNSEITTFQHHEQEQLVQQNHYFNEASLLDESFIFQTPNCFYSNETYPCQDQLLVDSTFSSQNDGFVSMNEIFPNDEDFIFNNYQLPCPKRQKLYYEEKREEPQQELLNSTNFFVDDFMTNPFASFEAEVEPPFAASKIVQCEKQVTERTISSQSIAARERRRKITEKTQELGKLVPGGPKMNTAEMLNAAANYVKFLQAQVGMLQLMETFSKEEKEPPPSEDLHKLVVSPFVQEKLYSEEKCFVPKEFITTLTNHSDVQSKPTILKGLKQLVGTEIEKKPKQE 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02627 306 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 220 IPR011598 GO:0046983
Mepo6g02627 306 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 173 231 IPR036638 GO:0046983
Mepo6g02627 306 Pfam Helix-loop-helix DNA-binding domain 177 221 IPR011598 GO:0046983
Mepo6g02627 306 Gene3D - 169 239 IPR036638 GO:0046983
Mepo6g02627 306 SMART finulus 177 226 IPR011598 GO:0046983
Mepo6g02627 306 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 23 268 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02627 Mepo-Chr6 36226096 36227898 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02627 86 299 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G34820 41.150 3.16e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo6g02627 HLH 2.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02627 - - tpra:123914583 439.499