LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo6g02573	ATGTCTCTTTCACGATTCATCATTCCTCTCTCTTGCATTTCAACTTCAGATTCTTCGATGATAACATCAACTGCGAAGAAGAATACAAACGCTACTACAGCTTTGTGTTTTGAAGACACTAATGAAAGAATCAAGAACATGTTCAACAAGGTTGAACTTTCAATTTCTTCGTATGATACAGCTTTTGTGGCAATGATTCCTTCTTCAACGTCGCCTCACGCGCCGTTTTTCCCTCAGTGCTTGAATTGGTTACTGGATAATCAACTCGTGGATGGCTCCTGGGGTCTTCCCGATCGCCATCCATTGTTGATCAATGATGCTCTCTTGTCTACCCTAGCGTGTATCATTGCATTAAAGCAATGGGGTATTGGTGAAGATAAGATGAACAAGGGACTTAAATTTATTGAGTCAAACTTGACTTCAATCAATGATGACAAACAACACCATCCCATAGGATTTGATATACTTTTTCCGTCATTGATTGAATATGCACAAAATTTGGGAATTAATCTTCCAATTGGAGCCGCAAGCTTGGAAGCAATGATCCAGAAGAGAGACAAAGAGCTCCAAAGAGGCTTTCAAAGCGATTCAGAAGGGTGGAAAGCATATCTAGCATATGTATCAGAAGGAATGTTGAACTCATTGGACTTGAATACAATCATGAAGTATCAAAGAAAGAATGGATCTTTCTTTAATTCACCTGCTACAACAGCAGCCGCTTTTCAGCACTTAAAGAATGCCGACTGTCTTAGTTACCTTCAATCAGTATTAGAAAAGTTTGGGAATGCTGTTCCGACTGTTTATCCTCTGGATATATATGCCCGTCTCTATATGATTGACAGCCTTGAAAGGCTGGGTATTAATCATCATTTCAAAGAGGAAATTCGTAGTGTATTGGATGAAACATACAGATATTGGCTACAAGGAGCAGAAGATATATTTTTAGATCCTACAACCTGTGCAATGGCATTTCGAATGTTGCGTCTCAATGGCTATGATGTCTCTTCAGATCCATTTTATGAATATTCAGAAGATAAATTTGCCAATTCCTTGAAAGGGTACTTGAAAGATGTTAGTGCTGTTTTAGAGCTATATAGGGCTTCGCAAGTCATTATACATCCGGATGAATCGATTTTGGTAAAACAAAGTTCTTGGACAAAAAATCTTCTGAAGCAGGACTCTTCTTTTAACCAATTATACGCTGATAAAATTCGCATTTATGTTGATAATGAGGTCAATGATGTTCTTAAGTTTCCATATCATGCGAATTTAGAGCGTTTGTTAAACAGGAGATCAGTGGAGCATTACAATGCAGATGAAACAAGGATTTTAAAAACATCATACAGATCTTGCAATCTTGCAAACCAAGAAATTCTGAAGCTAGCAGTAGGAGATTTCAATCTCTGCCAATCAATACACAATAAAGAGTTGAAACAACTTTCAAGGTGGATTGTTGAAAGCAAACTGGACAAACTAGAATTTGCGAGGCAGAAACTGGCATATTGTTACTTCTCCAGTGCAGCTACTCTTTATTCCCCCAAACTTTCTGATGCTCGCATATCTTGGGCGAAAAATGGGGTGCTCACAACGGTTGTTGATGATTTCTTTGATGTGGGGAGTTCTGAAGAAGAGCAAGTGAACCTTATTCAACTGATGGAGAAGTGGGATGTAGATGTCAGTACTGTTTGCTGTTCTGAGGCGGTAAAGATAATATTTTCTGCAGTTCGTAGCACAATTTGCGAGATTGGAGAGAAATCTGTTGAGCGGCAAGGACGCAATGTGAAAGACAATGTTATCAAAATTTGGTTAGATTTGATGCGCTCTATGTTTACAGAAGCTGAGTGGTCGAGAACCAAGACCATCCCAACAATCGATGATTACATGCAAAATGCATATGTATCATTTGCCTTAGGACCTATTGTTCTTCCAGCACTCTATCTTGTTGGACCTAAGCTTTCAGACGATGTGTCCGAAAATCAGGAATTGGATCATCTCTTCAGGACCATGAGCACTTCCGGGCGTCTTCTCAATGATATTCAAGGTTTTAAGAGAGAATCCGAAGAAGGGAAACTGAATGCAGTGAGTTTGCATATGGTTCATGGTAATGGAGCTGTTACTTACAATGACGCCATTGATAAGCTGAAGGGTGTTATTGAGGACAAGAGAAGAGAGCTCCTGAGATTAGTTTTGCTGGAAAAAGGAAGCTTAGTTCCAAGAGACTGCAAGGATCTGTTTTGGAAAATGATGAAAGTGTTGAACCTATTTTACATGAAGGATGATGGATTTACTTCAAATGAGATGCACTCTACTGTTAATGCGGTACTTAAAGATCCGATTATTCTTGATGAATTGTTGGTAGATTCTAAGAAACACCCTCTGCCAAAGGCAGTAGAGGTGTGA	2400	0.3908	MSLSRFIIPLSCISTSDSSMITSTAKKNTNATTALCFEDTNERIKNMFNKVELSISSYDTAFVAMIPSSTSPHAPFFPQCLNWLLDNQLVDGSWGLPDRHPLLINDALLSTLACIIALKQWGIGEDKMNKGLKFIESNLTSINDDKQHHPIGFDILFPSLIEYAQNLGINLPIGAASLEAMIQKRDKELQRGFQSDSEGWKAYLAYVSEGMLNSLDLNTIMKYQRKNGSFFNSPATTAAAFQHLKNADCLSYLQSVLEKFGNAVPTVYPLDIYARLYMIDSLERLGINHHFKEEIRSVLDETYRYWLQGAEDIFLDPTTCAMAFRMLRLNGYDVSSDPFYEYSEDKFANSLKGYLKDVSAVLELYRASQVIIHPDESILVKQSSWTKNLLKQDSSFNQLYADKIRIYVDNEVNDVLKFPYHANLERLLNRRSVEHYNADETRILKTSYRSCNLANQEILKLAVGDFNLCQSIHNKELKQLSRWIVESKLDKLEFARQKLAYCYFSSAATLYSPKLSDARISWAKNGVLTTVVDDFFDVGSSEEEQVNLIQLMEKWDVDVSTVCCSEAVKIIFSAVRSTICEIGEKSVERQGRNVKDNVIKIWLDLMRSMFTEAEWSRTKTIPTIDDYMQNAYVSFALGPIVLPALYLVGPKLSDDVSENQELDHLFRTMSTSGRLLNDIQGFKRESEEGKLNAVSLHMVHGNGAVTYNDAIDKLKGVIEDKRRELLRLVLLEKGSLVPRDCKDLFWKMMKVLNLFYMKDDGFTSNEMHSTVNAVLKDPIILDELLVDSKKHPLPKAVEV	799

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo6g02573	799	FunFam	Ent-copalyl diphosphate synthase, chloroplastic	249	466	-	-
	Mepo6g02573	799	CDD	Terpene_cyclase_plant_C1	266	778	IPR044814	GO:0010333\|GO:0016102
	Mepo6g02573	799	PANTHER	ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC	37	778	-	-
	Mepo6g02573	799	SUPERFAMILY	Terpenoid cyclases/Protein prenyltransferases	226	440	IPR008930	-
	Mepo6g02573	799	FunFam	Ent-kaur-16-ene synthase, chloroplastic	469	781	-	-
	Mepo6g02573	799	Gene3D	-	45	466	IPR036965	GO:0010333\|GO:0016829
	Mepo6g02573	799	FunFam	cis-abienol synthase, chloroplastic	54	257	-	-
	Mepo6g02573	799	Pfam	Terpene synthase family, metal binding domain	459	724	IPR005630	GO:0000287\|GO:0010333\|GO:0016829
	Mepo6g02573	799	SUPERFAMILY	Terpenoid cyclases/Protein prenyltransferases	57	248	IPR008930	-
	Mepo6g02573	799	Gene3D	Farnesyl Diphosphate Synthase	469	785	IPR008949	-
	Mepo6g02573	799	Pfam	Terpene synthase, N-terminal domain	218	413	IPR001906	GO:0010333\|GO:0016829
	Mepo6g02573	799	Gene3D	-	54	257	-	-
	Mepo6g02573	799	SUPERFAMILY	Terpenoid synthases	455	779	IPR008949	-
	Mepo6g02573	799	SFLD	Terpene Cyclase Like 1 N-term	18	449	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo6g02573	Mepo-Chr6	35393532	35399838	Dispersed/Proximal

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo6g02573	K04121		-	gmx:100793849	1227.23

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo6g02573	6	35393532	35399838	Mepo6g02573	6	35393532	35399838	ECH