Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02559 ATGGGCCATCGTTGTTGCAGCAAGCAGAAGATCAAAAGAGGATTATGGTCTCCTGAAGAAGATGATAAGCTTGTTACATATATCACCACTCATGGACATAAAAGCTGGAGTTCTGTTCCAAAATTTGCAGGCCTGCAAAGATGTGGAAAGAGTTGCAGATTAAGATGGACAAACTATTTGAGACCAGATCTAAAAAGAGGTTCCTTCACTGCTGAAGAAGAGCAGATCATAATTGACATACATAGAATTCTTGGAAACAGATGGGCCCAAATAGCAAAGCACCTTCCTGGTAGAACTGACAATGAAGTGAAGAATTTTTGGAACTCTTGCATTAAAAAGAAGCTAATTTCTCAAGGCTTAGATCCACAAACTCACAATTTACTATCTTCTTCTCATCCTAAGAGAAACAACTCATCTTATCAAAGTTCCACTTCCATTTTCATTCTTAGTTCTCAAATGCCACAAAATACTAATTATCTCATTGAAACAACAAATCAAACTTTTCCTTCACAAAATAATATTCTTCAAACTCCTACAAATGTTTCCCCTAACCAATATCAAACATCTTTCAATGTACTTTCAAATCAACTCGTTGTTTCCGAGCACGAACTGCCTCGAAAATTGACTGAGAACATACCAAACATTTGTTCTACTTCCTGCAATGAGAATAGCATATGGGTTTCAAGAGTTGATGATTGTAGAGGTTCAATATTAGAAGAAGGAACACAAGCTCATGTGGAGCAAGAAAAGGAGAAGATTTGTGAGAAGGGAATGGATGAAAAAGAAGTTAATGAGAAAGAAGATATTGAAATGAATGGTTGTTTTGAGAATTCTAACTTTGATTTTGGGTTGTTGGAGAGTGTACTTAACTCTGAATTTATATCTCATGATCTAGACTATATGAATCAACTTGCATGGAACTTTTAA 927 0.356 MGHRCCSKQKIKRGLWSPEEDDKLVTYITTHGHKSWSSVPKFAGLQRCGKSCRLRWTNYLRPDLKRGSFTAEEEQIIIDIHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGLDPQTHNLLSSSHPKRNNSSYQSSTSIFILSSQMPQNTNYLIETTNQTFPSQNNILQTPTNVSPNQYQTSFNVLSNQLVVSEHELPRKLTENIPNICSTSCNENSIWVSRVDDCRGSILEEGTQAHVEQEKEKICEKGMDEKEVNEKEDIEMNGCFENSNFDFGLLESVLNSEFISHDLDYMNQLAWNF 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02559 308 Pfam Myb-like DNA-binding domain 66 109 IPR001005 -
Mepo6g02559 308 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Mepo6g02559 308 CDD SANT 68 108 IPR001005 -
Mepo6g02559 308 PANTHER MYB DOMAIN PROTEIN 55 1 251 - -
Mepo6g02559 308 Gene3D - 10 66 - -
Mepo6g02559 308 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Mepo6g02559 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Mepo6g02559 308 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Mepo6g02559 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Mepo6g02559 308 FunFam MYB transcription factor 5 65 - -
Mepo6g02559 308 FunFam Transcription factor MYB86 67 143 - -
Mepo6g02559 308 Gene3D - 67 143 - -
Mepo6g02559 308 CDD SANT 16 60 IPR001005 -
Mepo6g02559 308 SMART sant 65 113 IPR001005 -
Mepo6g02559 308 SMART sant 12 62 IPR001005 -
Mepo6g02559 308 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02559 Mepo-Chr6 35040381 35042384 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02559 1 205 MYB Transcription Factor Family AT3G12720 57.522 9.49e-86 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo6g02559 Myb_DNA-binding 7.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02559 K09422 - gmx:100791209 383.259