Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02533 ATGTTCTACCCTTCAAGCAGTGAAGTGCAAGAATACTTTGGAAATTCTGAAAAGCCATGGAATGGTAAGCAGTTGAGATATTGGACAGTTTGTTGTGAATTCCATGTTAATGAGTTCGGTATTAATGTTATAAACAAGATTGGATTGTTTGTTACGCCTCCTACGTTCAGTCTTCCCATGCATTTTGAGATTGAAAAACCTGTTGCACCAGATTTTGTGTACCAGAATGTCCCAATAACAACTGAAATCTTAACTTTTCGTCACAAGGAAAGTAACTTTGAGTTGAACACTGAGGTCAAGCTAACCAAGTATGATGTAACTTCTGGCTTTTTGATGATTCCCTACAATTCTTTTGGCAGACTGGCATTGGGTAAGAAAACAACTTCTGTTGTTGTCATTGATGATTGTGGAAATACCTGGAGGTGTATTGTTGTGTACGGAACAAGGCCAAATAATCATATCAAAATTGGTGGCAGCTGGGGTCGTTTGGTGGATGAGCGTAGACTTGCAATTGGAGTAAAGATCAAAGTTGGTGTTCCAAGGGTTGGGAAGAATGACACTGTTTTTATCTGTATCAAGCGTCATAATGTTATTTTTATTATGGTTGTTCTTCATTTACATTTGCACATTCTTGGCAACTTGCAAGCAGCCTACACTATTATTGCTTATCTGGGTGGAAAGATCCATGCTACAGTTAGGAAATCCTTAGTGTCAATGATCAAAGAAATGGTGCAAGAGGGCTCGACATATAAGATTGAAAATGTCATGGTTGGTTTTAATGACAATGCTTATAAGCTAACAACACACAAGTATAAGATTATCATGATGGGAAATTCTAAGTTTACCAAAGTTAACTCAACTAACATACCCAAGAATGTTTTTGATTTCATTGCTTTTAAGGATGTGCTTAGCTTTGTGCAAGAAGAGAAAATTATTGATATTATCGGACATGTGATTGAAAAGGATGATATTAGAGAGAATAATAGGAATGGTAGAAAAAGCAAAGTGATGGATCTTACTTTGGAGGATTTGGAGAACAATAAAATGCATTGTTCTTTATGGGGTGAGTTTGCTGAAATGATGGATAGGTATTTCCATTCCCACGATAAGAATGAGAATGTGATCTTGATTTTGCAATTTTGCAAAACAAGGAAGTACCAGGGTGCAATGGGAATTGCCAATGCTTTCTTTGGCACCAAGTTAATATTAAATGGTGATCTACATGAGGTCAACTCTTACAAGGAAAGGGTGAATGGGGATGATGTCCAAATGACACAGGGTGTCAGTCAAATGACTTCGCAAAGCGCTGTTAAACTCTCGGATGAATTGCTGAATACCAAACTAATGACTATTGAGGATTTGATAGAATCTACTGAGGCATGCCATGGTTCTGTTCTTGCCACTGTATGTGAGATAGAGACTGGTGTAGATTGGTACTTCCAATCTTGCACTCAGTGTGCGTCATTAGTTACGGTTAATGATGGTGTTTTATGCTGCCGCAAGTGTCGTGAATGCAAGAGTGCCATGCCAAGGTACAAATTGCACTTGGTTGTTATGGATAATACTGGATCGACAACATTTGTGTTGTTTGATCGTTTTGTGACACAATATATTGGATGA 1620 0.3784 MFYPSSSEVQEYFGNSEKPWNGKQLRYWTVCCEFHVNEFGINVINKIGLFVTPPTFSLPMHFEIEKPVAPDFVYQNVPITTEILTFRHKESNFELNTEVKLTKYDVTSGFLMIPYNSFGRLALGKKTTSVVVIDDCGNTWRCIVVYGTRPNNHIKIGGSWGRLVDERRLAIGVKIKVGVPRVGKNDTVFICIKRHNVIFIMVVLHLHLHILGNLQAAYTIIAYLGGKIHATVRKSLVSMIKEMVQEGSTYKIENVMVGFNDNAYKLTTHKYKIIMMGNSKFTKVNSTNIPKNVFDFIAFKDVLSFVQEEKIIDIIGHVIEKDDIRENNRNGRKSKVMDLTLEDLENNKMHCSLWGEFAEMMDRYFHSHDKNENVILILQFCKTRKYQGAMGIANAFFGTKLILNGDLHEVNSYKERVNGDDVQMTQGVSQMTSQSAVKLSDELLNTKLMTIEDLIESTEACHGSVLATVCEIETGVDWYFQSCTQCASLVTVNDGVLCCRKCRECKSAMPRYKLHLVVMDNTGSTTFVLFDRFVTQYIG 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02533 539 Gene3D - 287 426 IPR012340 -
Mepo6g02533 539 Gene3D - 427 539 IPR012340 -
Mepo6g02533 539 CDD RPA1_DBD_B_like 313 417 - -
Mepo6g02533 539 SUPERFAMILY Nucleic acid-binding proteins 294 424 IPR012340 -
Mepo6g02533 539 SUPERFAMILY Nucleic acid-binding proteins 446 539 IPR012340 -
Mepo6g02533 539 Pfam Domain of unknown function DUF223 224 299 IPR003871 -
Mepo6g02533 539 SUPERFAMILY DNA-binding pseudobarrel domain 99 172 IPR015300 -
Mepo6g02533 539 Gene3D - 124 286 IPR012340 -
Mepo6g02533 539 SUPERFAMILY Nucleic acid-binding proteins 226 284 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02533 Mepo-Chr6 34685463 34691701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02533 217 539 Core DNA Replication Machinery Family AT2G06510 22.449 2.86e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02533 - - mtr:120577762 419.083