Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02522 ATGGAAGTTTCAACTAAAAAAGCAAAGTTTCTTGTACTTGTTGGAGAATCATTTCCTATGAGAAGGGCTTTGTTGAATTCTAGATTTGCTTGGTTTCATAGTAGTGTGAGATGTTTGAACAAACATGATTCTTTGACCCTTTCAAGCGTTGGTTTTGAAAGTGAAATTGAGCCAAAGATTATAAGTGAAGAAAATAAGGTTAAGCCATTAGGTTTATCTTCTTCGGAGGGTTTTAAGGTGAAAAGAAAACCCTTTGGAGTTAGTGAGAAGAAAGGTGTTAGGGTTAAGGAGAGAAAAGATATAGAGAATGCCCCTTTTGCTGCTAAGTCGTTTTCGGAACTTGGTATTCCGGAAGTGCTGATTGAGAGGTTAGGAAAAGAGGGTTTTAATGTTCCGACTGATGTTCAGTCTGCTGCGGTGCCTACCATTTTGAAGAACCGTGATGTCATAATTCAGTCTTATACGGGTTCGGGAAAGACATTGGCTTATCTGCTTCCTATATTGTCTGTTATTGGGCCGCTGAGAGGAGAAAATCGTGAAGGGGGTGGTGATGGTGGTGAGGCAGGGAAGAAATTGGGAGTAGAAGCGGTGATTGTTGCTCCTTCGAGGGAGCTTGGAATGCAGATTGTGAGAGAGTTTGAGAAGATATTGGGAATGGATAACAGGAAAGTGGTTCAGCAGCTTGTGGGAGGTGCGAACCGAACCAGGCAGGAAGAAGCCCTTAAGAAAAACAAACCTGCTATTGTTGTTGGTACGCCTGGTAGGATAGCCGAGCTTAGTGCAAGTGGGAAACTTCGTACTCACGGCTGTCAGTATTTGGTATTAGATGAAGTTGACGAGCTCCTTTCGTTCAATTTCAGGGAAGATATGCACAGGTTATTGGAGCATGTTGGGAGGAGATCGGGTGCAGACCATAACTCAAATGCTAAAAAAACTGAGCGTCAGTTAATTATGGTATCCGCAACTGTGCCGTTTTCGGTTGTAAGGGCAGCTAAAAGCTGGGGTTCTGACCCACTTCTTGTTCAAGCTAAGAAAATTGTACCGCTTGAAACATTGTCCCCTGAGCCAGTCAATTTGTCACCGAGCTCTAGTTCTACCCCGTCTGTACCATCTAAGGCTGTGGTAGAGAGTCTACCTCCAGCATTGAAACACTATTACTGTGTAGTGAGGTTGCAGCACAAAGTTGATACATTGAGAAGGTGTATTCATGCACTGGATGCCAAATTCGTGATAGTTTTCATGAATCATACTAAGCAGTTAAAGGATGTTGTCTTCAAGCTGGAAGCCCGTGGGGTGAAAGCTGCAGAGTTACATGGGGATCTTGGGAAGCTTGGTAGGTCGACAACTCTGAAGAAGTTTAAGAATGGTGAGGTTAGAGTTCTTGTGACAAATGAATTATCAGCAAGAGGTTTGGATGTGGCAGAATGTGATCTTGTGGTAAACCTGGACTTACCGACAGATTCAATTCACTATGCACACCGAGCTGGTCGAACTGGTCGGCTTGGTAGGAATGGTACTGTGCTGACCATATGTGAAGAGTCAGAGGTTTTTGTTGTGAGAAAATTGAAGAAGCAACTTGAAATACCGATTGCGTGCTGTAATTTTGTTGAGGGGAAGCTTATTATCACTGAAGAAGAAGAGAATGCACCAAGAAGCACTTCTTGA 1665 0.4324 MEVSTKKAKFLVLVGESFPMRRALLNSRFAWFHSSVRCLNKHDSLTLSSVGFESEIEPKIISEENKVKPLGLSSSEGFKVKRKPFGVSEKKGVRVKERKDIENAPFAAKSFSELGIPEVLIERLGKEGFNVPTDVQSAAVPTILKNRDVIIQSYTGSGKTLAYLLPILSVIGPLRGENREGGGDGGEAGKKLGVEAVIVAPSRELGMQIVREFEKILGMDNRKVVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSASGKLRTHGCQYLVLDEVDELLSFNFREDMHRLLEHVGRRSGADHNSNAKKTERQLIMVSATVPFSVVRAAKSWGSDPLLVQAKKIVPLETLSPEPVNLSPSSSSTPSVPSKAVVESLPPALKHYYCVVRLQHKVDTLRRCIHALDAKFVIVFMNHTKQLKDVVFKLEARGVKAAELHGDLGKLGRSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRNGTVLTICEESEVFVVRKLKKQLEIPIACCNFVEGKLIITEEEENAPRSTS 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02522 554 SMART helicmild6 421 502 IPR001650 -
Mepo6g02522 554 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 523 IPR027417 -
Mepo6g02522 554 SMART ultradead3 128 360 IPR014001 -
Mepo6g02522 554 Gene3D - 379 535 IPR027417 -
Mepo6g02522 554 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 397 541 IPR001650 -
Mepo6g02522 554 CDD DEADc 120 342 - -
Mepo6g02522 554 Gene3D - 80 343 IPR027417 -
Mepo6g02522 554 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 94 540 - -
Mepo6g02522 554 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 140 341 IPR014001 -
Mepo6g02522 554 Pfam DEAD/DEAH box helicase 133 327 IPR011545 GO:0003676|GO:0005524
Mepo6g02522 554 CDD SF2_C_DEAD 382 511 - -
Mepo6g02522 554 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 109 137 IPR014014 GO:0003724
Mepo6g02522 554 Pfam Helicase conserved C-terminal domain 397 502 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02522 Mepo-Chr6 34391712 34393984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02522 110 536 Eukaryotic Initiation Factors Gene Family AT3G19760 25.635 5.13e-46 165