Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02515 ATGGCCAATTCTAAGTGGTCTCAAATTTTGTTCATTGTCATCATAACATTGGCAACCATTTTCCAATGTAACATTGCAACAGATCCATTTGTCCAACAAGGACAGGACAAGATTGGTAGAGCACTCCCAGGTCAAAACTTCAACATCAGCTTTGAACATTATTCTGGTTATATAACAGTGAATGAGGATGTTGGTAGGAATTTGTTTTACTGGTTCATTCAAGCTGATCATGTTGATCCTACTTCTAAGCCTCTTCTTTTATGGCTTAATGGTGGCCCTGGTTGTTCCTCTATTGCTTATGGTGAAGCTGAGGAAATTGGTCCTTTTCATATTAATTCTGATGCCAAAAACCTTCATTTTAATCCTTATGCTTGGAATCAAGTTGCCAATATTCTTTATATTGACTCTCCTGTTGGAGTTGGATTTTCATATTCAACAAAGAATTCATCTGATGACATTCTCAACAATGGCGATAAGAGGACAGCTGAGGATAATCTCATATTTCTATTGAAGTGGTTTAAGCGTTTTCCCCAGTACAAAAAAACAGACTTTTTCATCAGTGGTGAGAGCTATGCAGGACATTATGTTCCTCAACTTAGCCAAGTTATTGTCAAGTACAACTCAGCTACAAAACACGATTCTATAAATTTCAAAGGTTTCATGGTAGGAAATGCTCTAACAGATGATTTCCATGATCAATTGGGGATTTTCGAGTTTATGTGGGCAAATGGTATGATCTCGGATCAAACATTCAAGCTCTTGAACTTGCTATGTGATTTTCAGTCAGTCGAACACCCGTCACAGTCATGTGAAAGGATCTTGGAAATTGCTGATAAAGAAATGGGTAATATAGACCCATACAGTATCTTCACTCCTCCTTGCCATGCTAATGATAATCAGCGGGTCAAAAGAAAGAATAGTGTTGGAAGACTCAGAAGTGTGTATGATCCTTGCACCGAAAAGCACAGCACTATATACTTCAATCGACCAGAGGTCCAAAAGATTCTACATGTTGATCCAGATTATAAGCCTGCTAAATGGGAGACCTGCAGCACTGTGGTAAATACAAACTGGAAGGATTCTCCTAGGACAGTACTCGACATATATCGTGAACTTATTCCTACTGGTCTTCGAATATGGATATTCAGTGGTAATACAGATGCTGTAGTCCCGGTAACATCTACTCGCTATACTATAAATGCTCTCAAGCTTCCAACTGTGAGCCCCTGGCGTGCATGGTATGATGACGGGGAGGTAGGAGGATGGACCCAAGAATACGCCGGACTCACGTTTGTAAATGTACGGGGTGCCGGGCACGAAGTTCCTCTACATAGACCAAAACTTGCTCTAACATTGATCAAAGCCTTCTTAGCAGGAACCTCCATGCCAACTCTTGAACCACTCGCCGCGGCCTCTTGA 1419 0.4073 MANSKWSQILFIVIITLATIFQCNIATDPFVQQGQDKIGRALPGQNFNISFEHYSGYITVNEDVGRNLFYWFIQADHVDPTSKPLLLWLNGGPGCSSIAYGEAEEIGPFHINSDAKNLHFNPYAWNQVANILYIDSPVGVGFSYSTKNSSDDILNNGDKRTAEDNLIFLLKWFKRFPQYKKTDFFISGESYAGHYVPQLSQVIVKYNSATKHDSINFKGFMVGNALTDDFHDQLGIFEFMWANGMISDQTFKLLNLLCDFQSVEHPSQSCERILEIADKEMGNIDPYSIFTPPCHANDNQRVKRKNSVGRLRSVYDPCTEKHSTIYFNRPEVQKILHVDPDYKPAKWETCSTVVNTNWKDSPRTVLDIYRELIPTGLRIWIFSGNTDAVVPVTSTRYTINALKLPTVSPWRAWYDDGEVGGWTQEYAGLTFVNVRGAGHEVPLHRPKLALTLIKAFLAGTSMPTLEPLAAAS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02515 472 ProSitePatterns Serine carboxypeptidases, serine active site. 186 193 IPR018202 GO:0004185
Mepo6g02515 472 ProSitePatterns Serine carboxypeptidases, histidine active site. 429 446 IPR033124 GO:0004185
Mepo6g02515 472 FunFam Carboxypeptidase 32 296 - -
Mepo6g02515 472 FunFam Carboxypeptidase 365 459 - -
Mepo6g02515 472 Gene3D - 365 459 - -
Mepo6g02515 472 Gene3D - 318 356 - -
Mepo6g02515 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 446 IPR001563 GO:0004185|GO:0006508
Mepo6g02515 472 FunFam Carboxypeptidase 315 462 - -
Mepo6g02515 472 SUPERFAMILY alpha/beta-Hydrolases 40 462 IPR029058 -
Mepo6g02515 472 Gene3D alpha/beta hydrolase 34 296 IPR029058 -
Mepo6g02515 472 Pfam Serine carboxypeptidase 43 458 IPR001563 GO:0004185|GO:0006508
Mepo6g02515 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Mepo6g02515 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Mepo6g02515 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Mepo6g02515 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02515 Mepo-Chr6 34299839 34304225 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02515 345 462 Calmodulin-binding Proteins AT2G22960 25.210 1.30e-09 55.8