Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02504 ATGCCTGATTTACCAGAGATGAATCACAATACATCAGAAGAACATTTTGAGACACATCATAATGCTCGTAGTTATCCAAATTCAGGAAACAATTCACCAACTCATCACAAAAAGTTTAATTATGAAGAAAAAGAAGCATACAAAAATGAATATTCAGCAAGTGAATCTACTAAAAATATGGACCAAGTTTCTAAAACAGATTCAAATTCTGCAAATAAAACTAGACCACAGAAACTAAGTCCACCAAACAAAAACATTCCTGATGCTTTCTTAAGACAAAGTCCAAGGAACAGAATGCCTTCAAATTCTGATGCTGCAACTCCATTACCATCAGGAGTTTCAAAGGGCATGTCTACTAATACAAAGACGAACAATCAAGGTGCGCCAGGAAGTGGAGCTAGCTCTCGAAGCGACAGTTTAGAGAGCACAAGTTGTTCGGCAAACATTAGGCCACATACTGGTGGTGATATAAGGTGGGATGCAATTAACATGGCTTCCAGAAATGGTCCTCTAAATCTTACACATTTTAGGCTTCTGAAGCGTATCGGTTATGGAGACATTGGAAGTGTTTATCTTGTTGAACTTAAAGGAACTGATGCTCATTTTGCTATGAAAGTAATGGACAAGGCTGCTCTTATAAGTAGAAACAAACTTCTTAGATCACAAACTGAAAGGGAGATTCTTGGCCTTCTTGATCATCCCTTTTTGCCTACTTTGTATTCTTACTTTGAAACTGACAAGTTTTACTGTCTGGTTATGGAGTACTGTAGTGGCGGTGATCTTCATTCGCTCCGACAGAAACAACCAAATAAGTGTTTCACTGAAGAAGCTGCAAGGTTCTATGCTTCCGAGGTTTTGTTAGCTCTTGAATACCTACACATGCTTGGCATTGTATACAGAGACTTAAAGCCTGAAAATCTTTTAGTTCGGGACGAAGGTCACATCATGCTCTCAGATTTCGATTTATCACTTCGCTGTTCTGTCTGTCCAACACTTGTCAAGTCTTCCTCCACCCACGGAGGAAACAGCAGCGGCAATAGTGATTCCGGAGGTATATTGAATGATGACCAAGCAGTGATTTCTCAGTCATCAACAAGCTTTTTCCCTCGCATTTTACCTTCGAAGAAAAATCGAAAAGCAAAATCAGACTTCGGCCTATTGGTTAACGGAAACCGCCTTCCTGAACTAATGGCAGAACCAACCAATGTAAGATCAATGTCATTTGTAGGGACACACGAATATCTCGCACCTGAAATCATCAAAGGAGAAGGACATGGTAGCGCGGTAGATTGGTGGACTTTTGGTATCTTCTTGTATGAACTGTTGCACGGTGCAACGCCTTTTAAAGGCGCAGGATACAAAGCGACACTTTTCAATGTTGTTGGTCAGCCATTAAGGTTTCCAGATAGTCCTCAAATTAGTCCTGTGGCTAAAGATCTTATTAGAGGATTGTTGATTAAGGAACCTCAGAAGAGAATTGCATATAAAAGAGGAGCAACAGAAATAAAACAGCATCCATTTTTTGAAGGAGTGAATTGGGCTCTTGTTAGAAGTGCAACACCACCACATATACCAGATGCTATAGACTTTTCAAAGTATGCTAAAAAAGAAACAGCACCACCACCAGTTGATAAGAAGTTGCCAGATGTTGCCAATGATAAAAAAGGCAAAACTTCAACTGATAATTCTTATGTAGATTTTGAGTATTTTTAG 1713 0.3935 MPDLPEMNHNTSEEHFETHHNARSYPNSGNNSPTHHKKFNYEEKEAYKNEYSASESTKNMDQVSKTDSNSANKTRPQKLSPPNKNIPDAFLRQSPRNRMPSNSDAATPLPSGVSKGMSTNTKTNNQGAPGSGASSRSDSLESTSCSANIRPHTGGDIRWDAINMASRNGPLNLTHFRLLKRIGYGDIGSVYLVELKGTDAHFAMKVMDKAALISRNKLLRSQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEYCSGGDLHSLRQKQPNKCFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVCPTLVKSSSTHGGNSSGNSDSGGILNDDQAVISQSSTSFFPRILPSKKNRKAKSDFGLLVNGNRLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLHGATPFKGAGYKATLFNVVGQPLRFPDSPQISPVAKDLIRGLLIKEPQKRIAYKRGATEIKQHPFFEGVNWALVRSATPPHIPDAIDFSKYAKKETAPPPVDKKLPDVANDKKGKTSTDNSYVDFEYF 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02504 570 ProSiteProfiles Protein kinase domain profile. 176 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02504 570 PANTHER FLIPPASE KINASE 1-RELATED 35 536 - -
Mepo6g02504 570 Gene3D Phosphorylase Kinase; domain 1 174 259 - -
Mepo6g02504 570 MobiDBLite consensus disorder prediction 537 561 - -
Mepo6g02504 570 MobiDBLite consensus disorder prediction 36 51 - -
Mepo6g02504 570 ProSitePatterns Serine/Threonine protein kinases active-site signature. 297 309 IPR008271 GO:0004672|GO:0006468
Mepo6g02504 570 MobiDBLite consensus disorder prediction 95 149 - -
Mepo6g02504 570 FunFam Serine/threonine-protein kinase AGC1-5 174 259 - -
Mepo6g02504 570 SUPERFAMILY Protein kinase-like (PK-like) 167 526 IPR011009 -
Mepo6g02504 570 MobiDBLite consensus disorder prediction 1 149 - -
Mepo6g02504 570 SMART serkin_6 176 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02504 570 FunFam serine/threonine-protein kinase D6PK-like 260 327 - -
Mepo6g02504 570 CDD STKc_phototropin_like 174 529 - -
Mepo6g02504 570 Gene3D Transferase(Phosphotransferase) domain 1 260 327 - -
Mepo6g02504 570 MobiDBLite consensus disorder prediction 537 562 - -
Mepo6g02504 570 Gene3D Transferase(Phosphotransferase) domain 1 383 526 - -
Mepo6g02504 570 MobiDBLite consensus disorder prediction 52 81 - -
Mepo6g02504 570 Pfam Protein kinase domain 382 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02504 570 Pfam Protein kinase domain 177 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02504 570 FunFam Serine/threonine-protein kinase AGC1-7 401 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02504 Mepo-Chr6 34133130 34135522 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02504 140 570 AGC Kinase Gene Family AT1G79250 71.492 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mepo6g02504 Pkinase 1.9e-37 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g02504 6 34133130 34135522 Mepo1g03204 1 36791746 36793538 PCT