Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02461 ATGAACCATCCTGTGGGAATATGTGGTCGCTTTTCAAATTTGGGAATTCGTGATAATTTGTCAATTGGTGGGGGAAGAGGACCACAAGTAGTTGCACTAGCTTGCAAAATGGTGGGAGGTGGAAGTGATGGGTCATTGGATCTATGTGCAAGAGTTTGCTTAATAGATGAATATGAGAACATCATCTTCCATTCTTATGTCATTCCACCAATTCCAGTCACAAACTACAGGTATGAGACAACAGGTATTAGACATGAATATTTAAGAGATGCAATGCCATTGAAAGTAGTTCAAAGGAAGATTCAAGATTTTCTTTGTAATGGAGAACCTATTTGGACAATTCGGTCAAGAGGTGGAAAAGCTAGGATTCTTGTGGGTCATGGTTTAGATCATGACCTTGCATCTTTGCAAATTGAATATTCAACACCAAAAATAAGGGACACTGCAAAATACCCTCCACTTATGAAAACCAGCAAGCTCAGCAACTCACTCAAGTACTTAACACAAGCATATCTTGGGTACGACATTCAAACAGGGATACAAGATCCTTATGATGATTGTGTTGCAGCAATGAGACTCTACATGAGAATGAGAACCCAAAATCACAGAATAGAAGATTACCCTTTGGCATCTGATCCACAAAACAGAAACAATTTTGCTTCATGGAGGCAAAGTGAGCTTGAAAGAATGAGTCCTGAACAAATGCTAGATATCTCGAGGTCTGACTACTACTGCTGGTGCATGGACCCATGA 753 0.3984 MNHPVGICGRFSNLGIRDNLSIGGGRGPQVVALACKMVGGGSDGSLDLCARVCLIDEYENIIFHSYVIPPIPVTNYRYETTGIRHEYLRDAMPLKVVQRKIQDFLCNGEPIWTIRSRGGKARILVGHGLDHDLASLQIEYSTPKIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQTGIQDPYDDCVAAMRLYMRMRTQNHRIEDYPLASDPQNRNNFASWRQSELERMSPEQMLDISRSDYYCWCMDP 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02461 250 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 27 237 IPR047021 GO:0004527
Mepo6g02461 250 SMART exoiiiendus 29 203 IPR013520 -
Mepo6g02461 250 SUPERFAMILY Ribonuclease H-like 43 198 IPR012337 -
Mepo6g02461 250 Gene3D - 27 212 IPR036397 GO:0003676
Mepo6g02461 250 FunFam RNA exonuclease 4 26 213 - -
Mepo6g02461 250 CDD REX4_like 31 194 IPR037431 GO:0006364|GO:0008408
Mepo6g02461 250 Pfam Exonuclease 49 193 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02461 Mepo-Chr6 33699041 33701033 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02461 2 249 C2H2 Transcription Factor Family AT5G40310 73.200 1.29e-136 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02461 - - aprc:113862359 459.529