Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02420 ATGTCAGGTGAGGAAGCTGTTGCTGCAGTTGAACCTGTTGTCGCCACTGTTGCTGGAATTCCATGCGAGCCAATGGACATCATGACTGCCTTGCATTGTGTGCTTACGAAGTCACTGGCATTTGGTGGTCTTGCACGTGGCCTCCATGAAGAAGCAAAAAACCAACCTGGCTATGTTAAACTTGTCAAGGCTCTTTGTGCTGAGCACAATGTTAGTCTTCTGACAGTTCCTAGTGCAAAGACACTCGGAGAATGGGCTGGGGTTTGGGGAGGAACATGA 279 0.491 MSGEEAVAAVEPVVATVAGIPCEPMDIMTALHCVLTKSLAFGGLARGLHEEAKNQPGYVKLVKALCAEHNVSLLTVPSAKTLGEWAGVWGGT 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02420 92 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 55 87 IPR004038 -
Mepo6g02420 92 Gene3D - 51 91 IPR029064 -
Mepo6g02420 92 SUPERFAMILY L30e-like 24 89 IPR029064 -
Mepo6g02420 92 PANTHER 40S RIBOSOMAL PROTEIN S12 54 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02420 Mepo-Chr6 33151132 33151450 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02420 20 88 Cytoplasmic Ribosomal Protein Gene Family AT1G15930 60.000 1.36e-26 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02420 K02951 - gmx:100786733 119.398