LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo6g02418	ATGGATTTATCAGCTATGCCAAAAGCATTCTCAAACCAACATAGTTGGTATGAATCCACTCTTTCTCAAGTTACTACTATCAACAGTAATGTCAATTTTACCTCTTCTAAAATCAGTTATGCATACACCAATGTTATGAATGGTTTTAGCGCAAATCTATCACCTATAGAGCATGAAGCTATAAAAACCTCCCCTGGTTATATTTCTTCAATACTTGATTTACCCTTGAAGCTTGACACAACACACTCACCACAATTCCTTGGCCTTAATCCCTACAAAGGGGCATGGCCAGCTTCTGAGTTTGGCAAAAATGTTATTGTTGGTGTGATTGACACAGGTGTTTGGCCAGAAAATGAAAGTTTCAAAGATAATGGAATGACTAAAATTCCTGCAAAATGGAAAGGTCAGTTATGTCAATTTGAAAATACTAACAATTCATCTCTTTGCAACAAGAAACTCATTGGAGCTGGATTCTTCAACAAAGGTTTCTTGGCAAAAAATTCCAACATTAGTTCAACAACTGTGAACACCACACGTGACGAAGATGGTCATGGGACTCACACTTCATCAACTGCAGGTGGAAATCATGTTGACGGCGCATCATTCTTTGGTTATGCAAATGGAACAGCAAGAGGAATAGCTTCATTGTCTAGAGTAGCAGTGTACAAGGTTGTATGGGAAACAGATGGAGCTTCATTTTCATCTGATATAATAGCTGCAATCGATGCTGCAATATCGGATGGTGTCGATGTTCTTTCAATATCACTAGGCTCGAACAATTTAGCTTTGTATGAAGATCCAATTGCAATAGCCACTTTTGCAGCTATGGAAAAGGGTGTATTTGTGTCTACTTCAGCATGTAATAATGGGTCTTCCTTTAAAACTCTTCACAACGGAATACCATGGGTGATAACTGTTGCTGGTGGTACTTCGGATCGCGAATTCCATGGGAATCTTACACTTGGTAATGAAGTCTCACTCATCGGCTTATCTTCATATCTAGGAAACTTTTCTGCTAGCAATTTTCCAATTGTTTTCATGGGTATGTGTGATAATGTTAAAGAATTGATCAAAGTGAAGAGCGAAATTGTGGTATGTGAAGAAAAGAATGGAACTCTTGGTACTATGATTTCTAATGTGATTGAAGCAAAAGCCGTTGGGGCTGTTTTCATCTCAAACACATCATAA	1188	0.3813	MDLSAMPKAFSNQHSWYESTLSQVTTINSNVNFTSSKISYAYTNVMNGFSANLSPIEHEAIKTSPGYISSILDLPLKLDTTHSPQFLGLNPYKGAWPASEFGKNVIVGVIDTGVWPENESFKDNGMTKIPAKWKGQLCQFENTNNSSLCNKKLIGAGFFNKGFLAKNSNISSTTVNTTRDEDGHGTHTSSTAGGNHVDGASFFGYANGTARGIASLSRVAVYKVVWETDGASFSSDIIAAIDAAISDGVDVLSISLGSNNLALYEDPIAIATFAAMEKGVFVSTSACNNGSSFKTLHNGIPWVITVAGGTSDREFHGNLTLGNEVSLIGLSSYLGNFSASNFPIVFMGMCDNVKELIKVKSEIVVCEEKNGTLGTMISNVIEAKAVGAVFISNTS	395

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo6g02418	395	MobiDBLite	consensus disorder prediction	174	193	-	-
	Mepo6g02418	395	PRINTS	Subtilisin serine protease family (S8) signature	180	193	IPR015500	-
	Mepo6g02418	395	PRINTS	Subtilisin serine protease family (S8) signature	102	121	IPR015500	-
	Mepo6g02418	395	Pfam	Peptidase inhibitor I9	6	78	IPR010259	-
	Mepo6g02418	395	Pfam	Subtilase family	102	350	IPR000209	GO:0006508\|GO:0008236
	Mepo6g02418	395	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	34	393	IPR045051	-
	Mepo6g02418	395	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	1	79	IPR037045	-
	Mepo6g02418	395	Gene3D	Peptidase S8/S53 domain	104	311	IPR036852	GO:0004252\|GO:0006508
	Mepo6g02418	395	Gene3D	-	312	393	-	-
	Mepo6g02418	395	ProSitePatterns	Serine proteases, subtilase family, aspartic acid active site.	107	118	IPR023827	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo6g02418	Mepo-Chr6	33141363	33142550	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo6g02418	1	393	Subtilisin-like Serine Gene Family	AT5G67090	45.320	1.29e-111	341

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo6g02418	-		-	psat:127122029	545.814

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