Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02411 ATGGTTGGGGAAGCTGTTCGGGTGCGCCATAATTTCCCCCTTGTACCTCGTTTTCTGGTCGTTCATCACTCCCTCCATTGCTACGTTGCTGCTTCCCGCTGCCTTCAAGTAGGCACAAGTAACGATAGATTCGTCAGCAATGTCGCAATTACCTCTTTGTGGTTATCATGGAGGAGCGGACGAGAGAGCGAGAGCCAATGGCAAAAGGATTGGGAATCGGCAGCGCCTGTGGTCCCAGGGTTGAAGAAATCAGTACCGGGTGTTGTTCAGATAATCGTGTGCAGTTTGGAAGGAGTGGTGTGGATCAGAGGCATGGACTTCAGGAATAGTGAGCTGAAGTTGGTTTCCTGTATTGCTCTATGCCTCATTCTGGTCTCTCCTGCTGTGGCATTTGATCCATTGGATCCAACTGGAAATGTGACGATCAGATGGGACATCATGTCCTGGACTTCAGATGGCTATATGGCAACGGTAACATTGTTTAACTATCAATTATACCGAAACATTATGAACCCTGGATGGACACTAGGATGGACATGGGCTGATAAAGAAATCATATGGTCCATGATGGGAGCAACAGCAACAGAACAAGGAGACTGTTCAGACTTCAAGCTAAAGATTCCTCATAGTTGCAAGAAAAGTCCTCAAGTTGTTGACTTATTACCAGGAGCTTCTTATAATATGCAATACACAAACTGTTGCAAAGGTGGTGTGCTAACTTCTTGGGGAAAGGACCCTTCAGGTGCAATCTCAGCATTTCAGATGGGTGTGGGACTCTCTGGAAGTACTACCAAGACAGTGAAAATCCCTCAGGATTTTAAATTGCTTGGACCGGGACCGGGATATTCGTGTGGCCCTGCTAAGAGGGTTCCTTCCACTGTTTTTCTTACAGATGATCATAGAAGAAAAACTCAAGCCTTGATGTCATGGAATGTGACATGTACTTATTCACAGGTTCTTGCCTCCGAGAACCCAAGATGTTGTGTTTCTTTATCAAGCTTCTACAATGAACAAATCACAGCTTGCCCAACTTGTGCTTGTGGTTGTCAAAACAATGCTACTTGCGTCACGAAGGTTTCAGAGATCCTAAAAGAAGGTGAAGGAAAACCATTGTTAAAATGCAGACCCAACCTTTGTCCTGTTGGTGTGCATTGGCATATAAAATACAACTATAAGGGTTATTGGCGTGTCAAGATTACCATCTTCAACTTCGAATATAGAATGAAATACACACAGTGGAGTCTTGTTGTGCAACACCCCAATCTCAACAATGTTTCCCAAGTTTATAGCTTTAACTACATGCCACTTCCTTCGTATGAATCCATAAGTAAATACACAGGAATGTTCTATGGTATTAAATACTACAATGATCTAATATTGGAAGCTGGGGATAAAGGGTTTGTACAATCTGAGGTGCTTTTGCAGAAGGACAAGAAAATATTTACACTAAAGCAAAGATGGGCTTTTCCTAGAAGGTGTCGTACCCGTGCATACACAGGGGTCGAGCAGCAGACCGTGTATGGCGCGCGTTCATGCACCTTTAGTTAG 1548 0.4399 MVGEAVRVRHNFPLVPRFLVVHHSLHCYVAASRCLQVGTSNDRFVSNVAITSLWLSWRSGRESESQWQKDWESAAPVVPGLKKSVPGVVQIIVCSLEGVVWIRGMDFRNSELKLVSCIALCLILVSPAVAFDPLDPTGNVTIRWDIMSWTSDGYMATVTLFNYQLYRNIMNPGWTLGWTWADKEIIWSMMGATATEQGDCSDFKLKIPHSCKKSPQVVDLLPGASYNMQYTNCCKGGVLTSWGKDPSGAISAFQMGVGLSGSTTKTVKIPQDFKLLGPGPGYSCGPAKRVPSTVFLTDDHRRKTQALMSWNVTCTYSQVLASENPRCCVSLSSFYNEQITACPTCACGCQNNATCVTKVSEILKEGEGKPLLKCRPNLCPVGVHWHIKYNYKGYWRVKITIFNFEYRMKYTQWSLVVQHPNLNNVSQVYSFNYMPLPSYESISKYTGMFYGIKYYNDLILEAGDKGFVQSEVLLQKDKKIFTLKQRWAFPRRCRTRAYTGVEQQTVYGARSCTFS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02411 515 Pfam COBRA-like protein 154 317 IPR006918 GO:0010215|GO:0016020
Mepo6g02411 515 PANTHER PROTEIN COBRA 118 494 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02411 Mepo-Chr6 33078561 33087073 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02411 125 492 COBRA Gene Family AT3G02210 57.784 1.61e-169 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02411 - - gmx:100813134 639.802