Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02392 ATGCAAATGAAGAACCCAGAGGAGCATCAAGTGAAATCAAGGCCTGTACAAAAATGTACAGAACGTAGAAGAAAGAGCAAAAAGAGAAGAAACCAAATCAAGACAGATAAATCACAAGAAATAGGAGTTGATTCAAAGCTGGTTCCCTATCCAACTTGCAAGAGTAGCCTAATGTTTCCTTGCAGGCCTGGTTATGGCCAACTTGGGACTAAGTGTCTCATCAAAGCAAACCATTTTCTTGTAGATGTATCTGTCTCTGATTTAAGCCATTATAATGTGAAAATAATTCCTGAAGTTTGTTCTAGTAAAACAAGAAAGGCTGTTATATCTGAGCTTGTGAGGCTTCATAAGAACACTGATTTAGCGAATAGGCTCCCTGTGTATGATGGAGGAAGAAATCTTTACACTGCTGGTTTGCTTCCTTTTACATACAAAGAATTCAGTGTAATATTGAGTGAAGACGATTATGTTACCGGCGGTGTCAGGGAACGAGAATTTAAGGTGGGAATCAAGTTTGCAACTAGTGTTAGAATGCAACAACTTAGGGAACTTCTAAGTGGGAAACAAGTGGACACTCCACAAGAAGCACTTAGTGTCTTTGACATTGTTTTGAAGGAGGTTGCAGCTCAAAGTTACATATCAATTGGGAGAAATTTTTATTCTCCTGATTTGAGGAAACCACAGCCACTTGGTGGTGGCATTGAATCATGGCGTGGATTTTACCAGAGTATAAGGCCAACTCAGATGGGATTATCACTAAACATTGATATGTCATCAATGGCATTTATTGAACCACTACCTGTAATTGACTTCGTTGCTCAAATTCTTGGGAAAGATGTGCACTCAAAACCATTGTCAGATGCAGATCGTGTCAAGATTAAAAAGGCCCTAAGGGGAGTAAAAGTCGAAGTCACACATAGAGGAAATTTTAGAAGAAAGTACAGAATATCAGGATTGACTTCACAACCAACAAGGGAGCTTATTTTTCCTCTTGATGAGCAAATGAACATGAAATCAGTAGTTGATTATTTTCAAGAAATGTATGGATATACAATCAAATATTCTCATTTACCTTGCCTTCAAGTAGGAAGTCAAAGAAAGTTGAACTATTTGCCCATGGAGGCATGCAAGATAGTTAGGGGCCAAAGACAAACAAAAGGGCTGAATGAAAAGCAAATAACTTCTTTGTTGAAATTTTCATGCCAGAGACCCCGTGAACAAGAAACAGACATTTTACAGACAATTGAACAAAACAATTATGAAAATAATTCATATGCAAAGGAGTTTGGCATCAGCATAGATAACAAGCTTGCATCAGTGGAGGCTCGGGTTCTTCCTTCTCCATGGTTGAAATATCATGACTCTGGAAGAGAGAAAGAACACTTGCCACAAGTTGGTCAATGGAATATGCTGAACAAGAAAGTTATAAATGGAAGTAATATAAGATACTGGGCATGCATCAATTTCTCAAGAAGTGTACAAGAAAGTACAGCTCATGGATTTTGCCAACAGTTGGTTCAAATGTGTCAAATCACAGGCTTGGAATTTAGTCAGGAGCCTGTGATTCCTGTATATTCAGCAAGACCAGATCAGGTTAAGAAGGCTTTGAAGTATGTACATACTACTGCTCTAGACAAACTTGATGGTAAAGAGCTAGAATTGTTAATTGCCATTCTTCCAGACAATAATGGCTCTTTGTATGGTGATCTCAAAAGAATCTGTGAAACAGATTTGGGGCTGATTTCTCAATGCTGCCTTGCAAAATATGTATTCAAGATTAATAGACAGTACTTGGCAAATGTTGCACTAAAAATCAATGTCAAGATGGGAGGAAGAAACACGGTACTTTTGGATGCTTTAAGTTGGAGGATTCCACTGGTTAGTGATATTCCAACAATAATATTTGGAGCTGATGTAACTCATGCAGAATCCGGAGACGATAGTTGCCCATCCATCGCTGCTGTTGTAGCCTCCCAGGACTGGCCAGAAGTAACAAAGTATGCAGGGTTGGTTTGCGCTCAGCCTCACCGTGAAGAACTCATCCAAGATCTTTTCAAATCTTGGAAAGATCCACTGAGGGGAGTGGTTTACGGTGGTATGATCAGGGAGCTTTTGCTCTCGTTTAAGAGGGCAACTGGACAAAAACCATTGAGAATAATATTTTACAGGGATGGGGTAAGTGAAGGACAGTTCTACCAAGTTTTGTTGTATGAGCTTGACGCCATCCGAAAGGCTTGTGCGTCTTTGGAACCAAGTTACCAACCTCCGGTAACATTTGTTGTGGTTCAAAAACGGAATCACACTAGACTCTTCCCAAACAATCATGATGACAGAAACAGCACTGATCCCAGTGGGAACATCTTACCTGGTACTGTGGTGGATTCAAAGATATGTCATCCTACTGAATTTGATTTCTATTTATGCAGTCATGCAGGAATTCAGGGTACGAGTAGACCAGCACACTATCATGTCCTCTGGGATGAGAACAATTTCAGTCCGGATGAGATTCAGTCTTTAACTAACAACTTATGCTACACCTATGCAAGATGTACGCGGTCTGTTTCTGTAGTGCCTCCAGCATACTATGCTCATTTGGCAGCCTACAGAGCTCGATGCTACATGGAACCTGACCATCCTGAGATTGCAAAACTGCGAGGTGCGAGATCAAAAGATAGAGCTGTTAGGCCACTTCCTGCATTGAAAGAGAATGTGAAGAATGTAATGTTTTACTGTTGA 2736 0.4006 MQMKNPEEHQVKSRPVQKCTERRRKSKKRRNQIKTDKSQEIGVDSKLVPYPTCKSSLMFPCRPGYGQLGTKCLIKANHFLVDVSVSDLSHYNVKIIPEVCSSKTRKAVISELVRLHKNTDLANRLPVYDGGRNLYTAGLLPFTYKEFSVILSEDDYVTGGVREREFKVGIKFATSVRMQQLRELLSGKQVDTPQEALSVFDIVLKEVAAQSYISIGRNFYSPDLRKPQPLGGGIESWRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQILGKDVHSKPLSDADRVKIKKALRGVKVEVTHRGNFRRKYRISGLTSQPTRELIFPLDEQMNMKSVVDYFQEMYGYTIKYSHLPCLQVGSQRKLNYLPMEACKIVRGQRQTKGLNEKQITSLLKFSCQRPREQETDILQTIEQNNYENNSYAKEFGISIDNKLASVEARVLPSPWLKYHDSGREKEHLPQVGQWNMLNKKVINGSNIRYWACINFSRSVQESTAHGFCQQLVQMCQITGLEFSQEPVIPVYSARPDQVKKALKYVHTTALDKLDGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLAKYVFKINRQYLANVALKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHAESGDDSCPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKSWKDPLRGVVYGGMIRELLLSFKRATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRNHTRLFPNNHDDRNSTDPSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSPDEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARCYMEPDHPEIAKLRGARSKDRAVRPLPALKENVKNVMFYC 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02392 911 Pfam Argonaute linker 1 domain 214 263 IPR014811 -
Mepo6g02392 911 CDD PAZ_argonaute_like 265 379 - -
Mepo6g02392 911 Pfam PAZ domain 270 396 IPR003100 GO:0005515
Mepo6g02392 911 SMART PAZ_2_a_3 270 402 IPR003100 GO:0005515
Mepo6g02392 911 FunFam Protein argonaute-2 259 385 - -
Mepo6g02392 911 FunFam Argonaute 10 444 617 - -
Mepo6g02392 911 CDD Piwi_ago-like 425 874 IPR045246 -
Mepo6g02392 911 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 49 876 - -
Mepo6g02392 911 Pfam Mid domain of argonaute 463 540 IPR032473 -
Mepo6g02392 911 SMART Piwi_a_2 554 875 IPR003165 GO:0003676
Mepo6g02392 911 MobiDBLite consensus disorder prediction 1 38 - -
Mepo6g02392 911 Gene3D - 444 617 - -
Mepo6g02392 911 SUPERFAMILY Ribonuclease H-like 543 876 IPR012337 -
Mepo6g02392 911 Gene3D paz domain 260 384 - -
Mepo6g02392 911 SMART DUF1785_2 213 265 IPR014811 -
Mepo6g02392 911 MobiDBLite consensus disorder prediction 1 17 - -
Mepo6g02392 911 Pfam Argonaute linker 2 domain 408 452 IPR032472 -
Mepo6g02392 911 Gene3D - 623 911 IPR036397 GO:0003676
Mepo6g02392 911 MobiDBLite consensus disorder prediction 18 32 - -
Mepo6g02392 911 SUPERFAMILY PAZ domain 261 420 IPR036085 GO:0005515
Mepo6g02392 911 FunFam protein argonaute 10-like 623 911 - -
Mepo6g02392 911 Pfam N-terminal domain of argonaute 71 204 IPR032474 -
Mepo6g02392 911 ProSiteProfiles PAZ domain profile. 266 380 IPR003100 GO:0005515
Mepo6g02392 911 ProSiteProfiles Piwi domain profile. 554 875 IPR003165 GO:0003676
Mepo6g02392 911 Pfam Piwi domain 555 874 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02392 Mepo-Chr6 32662372 32670665 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02392 59 911 Eukaryotic Initiation Factors Gene Family AT5G43810 72.917 0.0 1355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02392 K11593 - gmx:100810235 1583.54