Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02380 ATGGCTATCCGAGCCACCTTTTCCTTTTCCGGCTATGTCGCTCAAAACCTAGTTTCCTCGGCCAGCGTTCGAGTCGCAAATCCTCGTGGTGTCCATGAATGCTGTATCCTCTCCCGTTTCTTTGGATCCAACCAAAAACCCGATCTGGATCGTTCCAGTGGCAGCATAGGTGAGAATTTCAGGAGGCCAAAAATGTCTACCTATTCTACTCTTGCGGGAGATCTTCTCACCGACGGTTTGATCTGGATGATGAAGTCAGCGTCTGTTGTTCCTGGGCCAACAACTACTATGATGGGTATTTCACCATTTAAACCCTCTTCAATTATACCATTGTTACAGGTTTCAAAGTGGCTTCCTTGTAATGAGTCTGTTATTAACCCCACAACGTGGGAAATCGCTGCTTCTAAACCACCAGAATCTCGTTTGTTGAATTTGAATCAAAAGGAGAATACTAGTAGTTGGATTTCCAAATATTCAAAAGATGCTAAAGCTGTATTCACTGCTTTCACTGTTAGTTTACTTTATAAATCGTCTTTGGCTGAACCTAAATCTATTCCATCTTCTTCTATGTATCCAACTCTTGAAATTGGTGACCGTGTTTTAACAGAAAAGTTTTCTTTATTCTTTAGGAAGCCTCATGTTTCTGATATTGTTATTTTCAAACCACCACAATTTTTGAAGGAATTTGGTTATAGTTCATCTGATGTTTTTATAAAAAGGATTGTGGCTAAGGCTGGTGATGTTGTCCAAGTTAAGGGTGGAAAACTACTGGTGAATGGTGTTGCTGAACAAGAGGAATTTGTTTTAGAGCCTCTTGCATATGAGTTGGCTCCAATGGTTGTTCCAGCAGGACATGTGTTTGTAATGGGAGACAATCGTAACCAGAGTTTTGATTCTCATAACTGGGGTCCGCTCCCGATCAAGAACATTGTTGGTAGGTCGATGTTTCGCTACTGGCCTCCATCAAAGGAAGATCACACTGTCATGGTTCAGAACGTTCTTAACACCACACCTTCCGCGGCATAG 1026 0.4181 MAIRATFSFSGYVAQNLVSSASVRVANPRGVHECCILSRFFGSNQKPDLDRSSGSIGENFRRPKMSTYSTLAGDLLTDGLIWMMKSASVVPGPTTTMMGISPFKPSSIIPLLQVSKWLPCNESVINPTTWEIAASKPPESRLLNLNQKENTSSWISKYSKDAKAVFTAFTVSLLYKSSLAEPKSIPSSSMYPTLEIGDRVLTEKFSLFFRKPHVSDIVIFKPPQFLKEFGYSSSDVFIKRIVAKAGDVVQVKGGKLLVNGVAEQEEFVLEPLAYELAPMVVPAGHVFVMGDNRNQSFDSHNWGPLPIKNIVGRSMFRYWPPSKEDHTVMVQNVLNTTPSAA 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02380 341 FunFam Peptidase/ serine-type peptidase 187 318 - -
Mepo6g02380 341 SUPERFAMILY LexA/Signal peptidase 179 326 IPR036286 -
Mepo6g02380 341 ProSitePatterns Signal peptidases I serine active site. 187 194 IPR019756 GO:0004252|GO:0016020
Mepo6g02380 341 Gene3D Umud Fragment, subunit A 176 336 - -
Mepo6g02380 341 NCBIfam signal peptidase I 164 320 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo6g02380 341 PRINTS Bacterial leader peptidase 1 (S26A) family signature 178 194 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo6g02380 341 PRINTS Bacterial leader peptidase 1 (S26A) family signature 281 300 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo6g02380 341 PRINTS Bacterial leader peptidase 1 (S26A) family signature 237 249 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo6g02380 341 ProSitePatterns Signal peptidases I signature 3. 286 299 IPR019758 GO:0004252|GO:0016020
Mepo6g02380 341 PANTHER SIGNAL PEPTIDASE I 149 323 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo6g02380 341 CDD S26_SPase_I 181 313 IPR019533 GO:0004252|GO:0006465
Mepo6g02380 341 Pfam Signal peptidase, peptidase S26 162 319 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02380 Mepo-Chr6 32351923 32352948 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02380 190 320 MADS-box Gene Family AT1G29960 33.083 4.06e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02380 K03100 - gmx:100802457 412.92