Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02376 ATGGAGGAATCATGGGAACATTGGCCTCTTCATTCGGAATTGGGTGATGTAGAGGATTTGCTAGGGCAATATTGTCAAACAAGTAATGATGATGAAGAAGAGTTCTTGAGAGACATGATACTTCAGCAACCTGTTACATATTCTGGAAGCAGTTTATCATCTTCTAGTGAGATGGATGGCACAGATAGCTCAAGGAAAAAGCTTCATCCTTCATCAACACCGTCCACTCCAAGGACATTTATTCTATCTTTCGATAAATCTACCATAATACCAGCTACTACACAAAAGAAGAGTAGAAGCTGTGGAAAATCTAGTGTGCTTTTGACGTCTAATAATAAGAGGAGTTTGGAACCAAAAGCAAAAGCTAGTAACCAAAGTGGAAAGAAGAGTAGAAGTGATTCTCAGTGTTTGGATCACATTATGGCAGAGAGAAAAAGGAGACTGGAACTATCACAGAAGTTCATTGCACTTTCAGCTACTATTCCTGGCTTGAAGAAGATGGACAAGAACTATATACTTGGTGAAGCAATCAGTTATGTGAAACTACTTCAAGAACGTGTGAAGGAGCTAGAGGATCCAAACAAGAATAGCAAAGAATCAACAATAATTCTCAAGAAAACTGATTTGTGTGTAAGTGAAGATACCACCTCAAACTCTGATCAGGATTGCTGCAAATCACCACTCTTTGATGTTAAAGCAAGAACATTGGAAAATGAGGTACTCATTCAGATCCACTGTGAGAAGGAAATTGACATTGAGATCAAAATATACAACGTGCTTGAAAATCTTGATCTCTTTGTCACTGCTAGCAGTGTATTGGCTTTTGGGACTTCAACTCTTGGCGTTACTATTGTCGCTCAGATGGGTGAAGGGTACAAAACGACGGTGAATGATTTGGTGAAAACTCTATGGCAAGTGCTGACTAGCAAAACTGATCCGTTCTAG 945 0.3926 MEESWEHWPLHSELGDVEDLLGQYCQTSNDDEEEFLRDMILQQPVTYSGSSLSSSSEMDGTDSSRKKLHPSSTPSTPRTFILSFDKSTIIPATTQKKSRSCGKSSVLLTSNNKRSLEPKAKASNQSGKKSRSDSQCLDHIMAERKRRLELSQKFIALSATIPGLKKMDKNYILGEAISYVKLLQERVKELEDPNKNSKESTIILKKTDLCVSEDTTSNSDQDCCKSPLFDVKARTLENEVLIQIHCEKEIDIEIKIYNVLENLDLFVTASSVLAFGTSTLGVTIVAQMGEGYKTTVNDLVKTLWQVLTSKTDPF 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02376 314 PANTHER BHLH TRANSCRIPTION FACTOR 32 309 - -
Mepo6g02376 314 Gene3D - 123 200 IPR036638 GO:0046983
Mepo6g02376 314 MobiDBLite consensus disorder prediction 95 131 - -
Mepo6g02376 314 MobiDBLite consensus disorder prediction 95 136 - -
Mepo6g02376 314 Pfam Helix-loop-helix DNA-binding domain 137 184 IPR011598 GO:0046983
Mepo6g02376 314 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 138 196 IPR036638 GO:0046983
Mepo6g02376 314 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 134 183 IPR011598 GO:0046983
Mepo6g02376 314 MobiDBLite consensus disorder prediction 46 78 - -
Mepo6g02376 314 SMART finulus 140 189 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02376 Mepo-Chr6 32288159 32291628 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02376 112 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.196 3.85e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo6g02376 HLH 3.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02376 - - tpra:123896700 332.413