Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02375 ATGGATGTGGAATATTTGTTAGAGATGTGCCACGAAGATGAAGACTTCCTTCGTGACTTCATGGCACAGCCAGTACCCGAAGCCGCCGCTGCCGCTACAGAGGGTGGCAGTGAGATGATTGCAGGCTCTGATGAGTCACCGGAGCTTCTTCCTCCGTCCACGTCCTCCAGAGCTTGCATTATTTCTTTGGATAACTCCGCGGCAATACCGTTACCAGCTGTGATGTCCAAATCCAAACCACCACGTTGTCCCACAAAAAAGATGACTTCTGAGAGAGGAAAAGGAGAAAAGAAGAATATTAAAACTCTAGATCATGCAATGGGAGAGAGGAAAAGGAGACTTGAACTTGGACACAAATTTATAGAGCTTTCAGCTATTATTCCTCGCTCAAACAAGACAGACAAAGCTTCTATCGTTGCTGGCGCAACCAATTACGTGGAGCAACTCCAGAAACGAGTGAAGGAGTTAGAAGTACAACAAAATAAGGGAGGCAAAGAACCAATGATACTTCCCAATAAGGAAAATTCTTGTAGAGTTTCACGTACCACATCATCTAGTGAAATGAATCTTGACAATTATCTTAGACCAAATGAATTTCTTCCTGATGTCAAAGTGAAAGTGTCGGTGTCGGAGAATAATATACTCATTTATATCAATTGTGAGAAGGAAAATGGCATTCAACACAAAATATTGGACATGCTTCAAAATCTTCATTTGTTTGTCACCAACACTAGTGTATTGCCATTTGGCAATTCAACTCTTGCCATAACTATCATCGCCAAGATGGGTGATGCATACAAAATGACACTGATGGATTTGGCGGACAACATAAGGCAATTCGTGTGTGTGAAGAATATTTGA 861 0.4181 MDVEYLLEMCHEDEDFLRDFMAQPVPEAAAAATEGGSEMIAGSDESPELLPPSTSSRACIISLDNSAAIPLPAVMSKSKPPRCPTKKMTSERGKGEKKNIKTLDHAMGERKRRLELGHKFIELSAIIPRSNKTDKASIVAGATNYVEQLQKRVKELEVQQNKGGKEPMILPNKENSCRVSRTTSSSEMNLDNYLRPNEFLPDVKVKVSVSENNILIYINCEKENGIQHKILDMLQNLHLFVTNTSVLPFGNSTLAITIIAKMGDAYKMTLMDLADNIRQFVCVKNI 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02375 286 Gene3D - 91 164 IPR036638 GO:0046983
Mepo6g02375 286 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 101 169 IPR036638 GO:0046983
Mepo6g02375 286 Pfam Helix-loop-helix DNA-binding domain 105 150 IPR011598 GO:0046983
Mepo6g02375 286 MobiDBLite consensus disorder prediction 74 96 - -
Mepo6g02375 286 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 100 149 IPR011598 GO:0046983
Mepo6g02375 286 PANTHER BHLH TRANSCRIPTION FACTOR 47 281 - -
Mepo6g02375 286 SMART finulus 106 155 IPR011598 GO:0046983
Mepo6g02375 286 Coils Coil 139 166 - -
Mepo6g02375 286 MobiDBLite consensus disorder prediction 28 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02375 Mepo-Chr6 32280568 32282595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02375 104 278 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 39.227 8.74e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo6g02375 HLH 2.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02375 - - mtr:11427210 309.686