Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02374 ATGGATTGGTTTGAATCGATGTGCCACAAGGATGGTGAATTCCTTGGCGACAATATGGCACAGCAATCATCTATAGTAGCCGGAGCCGCCGCTGCCACGGAGATTGCAAGCTCGCCTGAGCTGATTCCTAGAACTAGCATTTTCTCTTCTAATAATTCCATGGCCACAATACCAGGGAAGTCCAAACCACCTTGTTACCCCAAAAAGAGGACTTCCTCAAATATAAACTTTGAACCAAAAGCAAATGGCACAGGATTAGCCAAAGAAGAGAAGATTAATAGAAGCAAATCTAAGACTCTAGTTCACACACTGGCAGAGAGGAAAAGGAGACTTGAACTCGCACAAAAATTCACAGAGCTTTCAGCTGTAATTCCTCGCTCAAAGAAGACAGACAAGGCCTCTATAGTTCTAGGCGCTATCAATTATGTCGAAAAACTCCAAAGGCGAGTGATGGAGTTAGAAGTACAACAAAACAAGAGAGGCAAAGGACCAATCATAATTCTGGATAAGGAAAGTCAGCATGCAACTAGACATACCACATCTAGTCAAACCAATCTTGACAATTGTCTTAAACCCAATGAATTGCTCCCTAATGTCAAAGTAAAGGTGTTGGAGAGGAATATACTCATTTACATCACTTGTGAGAAGGAAAGTGGCATTGAACTCAAAATATTGGACATGCTTCAAAATCTTCATTTGTTTGTCACCAGCACCAGCGTGTTGCCGTTTGGCAATTCAACTCTTGGCATTACTACCATCGCTCTGATGGGTGATGCATACAGAATGACGATGATGGATCTAGAGGATAACGTAAAGCAATTGTTGGTGAATGGTGCAAATCGTCGAACATGA 852 0.4202 MDWFESMCHKDGEFLGDNMAQQSSIVAGAAAATEIASSPELIPRTSIFSSNNSMATIPGKSKPPCYPKKRTSSNINFEPKANGTGLAKEEKINRSKSKTLVHTLAERKRRLELAQKFTELSAVIPRSKKTDKASIVLGAINYVEKLQRRVMELEVQQNKRGKGPIIILDKESQHATRHTTSSQTNLDNCLKPNELLPNVKVKVLERNILIYITCEKESGIELKILDMLQNLHLFVTSTSVLPFGNSTLGITTIALMGDAYRMTMMDLEDNVKQLLVNGANRRT 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02374 283 Gene3D - 87 161 IPR036638 GO:0046983
Mepo6g02374 283 Pfam Helix-loop-helix DNA-binding domain 101 147 IPR011598 GO:0046983
Mepo6g02374 283 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 94 159 IPR036638 GO:0046983
Mepo6g02374 283 PANTHER BHLH TRANSCRIPTION FACTOR 35 274 - -
Mepo6g02374 283 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 97 146 IPR011598 GO:0046983
Mepo6g02374 283 SMART finulus 103 152 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02374 Mepo-Chr6 32265727 32271914 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02374 82 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 35.961 2.63e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo6g02374 HLH 4.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02374 - - mtr:11427210 423.705