Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02326 ATGGCCGAATCCGACAACGACCACCACACCTCACCCGAAAGCCAATTCAACGACAGTAACAAGAAGAAGAATAAGAAGCTTCGCAAGAGAAAAAGATCTCGTAAATTGGAACAAGAACTTGAAAAACAACAACAAGAAGAGGAAAAGAATAATGAAAACACAGAATCTGAAGCAGAAGAAGAAGTTGAAGAGAAGAAAGTTGAGAATGTTTTGCCTTCTGGAATTCTGAGTACTGAGTCTTTTTCATCTCTAGGGTTATCTCAACGTACTTCTCAGGCTATTGCTGCTATGAGTTTTACCCATATGACTCAGATTCAAGCGAAAGCGATTCCGCCACTATTGATGGGAAAGGATGTTCTTGGTGCTGCTAGGACGGGTTCTGGTAAAACACTTGCATTTTTAATTCCAGCTGTGGAATTGTTGTACAATGTGCAATTTACACCTCGTAATGGAACTGGTGTTATCGTCATTTGTCCAACTAGAGAGCTTGCCATTCAGACACACGCTGTGGCGAGTGAACTAATGAAAGGTTATCATTCGCAAACTTTGGGAAGGGTTATTGGTGGTGTGGGTAGAAAGGGAGAAGCGGAGCGCATTGTTAAAGGAGTAAATTTGTTGATTGCAACGCCTGGTCGTCTTCTTGACCACCTTCAGAATACAAAAGGATTTATATATAAAAACTTGAAGTGTCTCATGATTGATGAAGCAGACAGGATATTGGAATCAAACTTCGAGGAGGAAATGAAGCAGATCCTTAATATACTTCCAAAGAAAAGGCAAACAGCTTTGTTTTCAGCCACACAAACAAAGAAGGTTGAGGATCTTGCCCGCTTATCTTTTCAGACACCTCCTGTCTATGTTGATGTAGATATTGGGAGAGAAAAGGTCACTGTTGAAGGATTGGAACAGGGCTACGTTGTTGTTCCCTGTGCCAAGCGTTTTGTTGTTCTGTATTCGTTCTTGAAGAGATACCAATCTAAAAAAGTGATGGTGTTTTTCTCTTCATGCAACTCAGTCAAATTCCATGCCGATCTTCTTAAGTTCATTGGATTAGACTGTTTAAATATTCATGGAAAACAAAAGCAGAATTCCCGGACAAGTACCTTCTTCAACTTTTGCAAAGCAGAAAAAGGGATATTGCTCTGTACTGATGTTGCTGCTCGTGGACTTGACATACCTGCTGTGGACTGGATTGTGCAGTTTGATCCACCTGACGAACCAAAGGAATATATCCATAGAGTTGGTCGAACAGCTCGTGGGGAAGGTGGAAAAGGAAATGCTTTACTTTTCCTGATTCCTGAAGAATTGCAATTTCTTCGCTACTTGAAGGCAGCAAAGGTTCCTGTGAAAGAGTATGCATTTGATGATAAAAAGCTTTCAAATGTACAATCTCAACTGGAGAAGATGGTGGCCAGCGTTTATCATTTGAACACTCTGGCCAAAGAGGCTTATAGGTCATATATATTGGCATATAATGCACATTCTATGAAGGAAATATTCAATGTTCACCGCCTTGATTTACAGGCTGTTGCTACGTCATTCTGCTTTACAAACCCACCGAAGATAAGTTTGAACATAGACAGCAGTGCTTCGAAGCATAGGAAGAAAATTCAAAAAGTGGAAGGAGGAAGAAGACATTGA 1641 0.4059 MAESDNDHHTSPESQFNDSNKKKNKKLRKRKRSRKLEQELEKQQQEEEKNNENTESEAEEEVEEKKVENVLPSGILSTESFSSLGLSQRTSQAIAAMSFTHMTQIQAKAIPPLLMGKDVLGAARTGSGKTLAFLIPAVELLYNVQFTPRNGTGVIVICPTRELAIQTHAVASELMKGYHSQTLGRVIGGVGRKGEAERIVKGVNLLIATPGRLLDHLQNTKGFIYKNLKCLMIDEADRILESNFEEEMKQILNILPKKRQTALFSATQTKKVEDLARLSFQTPPVYVDVDIGREKVTVEGLEQGYVVVPCAKRFVVLYSFLKRYQSKKVMVFFSSCNSVKFHADLLKFIGLDCLNIHGKQKQNSRTSTFFNFCKAEKGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKEYAFDDKKLSNVQSQLEKMVASVYHLNTLAKEAYRSYILAYNAHSMKEIFNVHRLDLQAVATSFCFTNPPKISLNIDSSASKHRKKIQKVEGGRRH 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02326 546 MobiDBLite consensus disorder prediction 1 69 - -
Mepo6g02326 546 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 232 240 IPR000629 -
Mepo6g02326 546 SMART helicmild6 340 421 IPR001650 -
Mepo6g02326 546 PANTHER RNA HELICASE 34 463 - -
Mepo6g02326 546 Pfam Domain of unknown function (DUF4217) 462 522 IPR025313 -
Mepo6g02326 546 CDD DEADc_DDX18 90 288 IPR044773 GO:0003724|GO:0005524
Mepo6g02326 546 MobiDBLite consensus disorder prediction 34 51 - -
Mepo6g02326 546 Pfam DEAD/DEAH box helicase 103 275 IPR011545 GO:0003676|GO:0005524
Mepo6g02326 546 Gene3D - 16 290 IPR027417 -
Mepo6g02326 546 Gene3D - 299 540 IPR027417 -
Mepo6g02326 546 MobiDBLite consensus disorder prediction 1 21 - -
Mepo6g02326 546 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 442 IPR027417 -
Mepo6g02326 546 FunFam RNA helicase 297 527 - -
Mepo6g02326 546 CDD SF2_C_DEAD 301 431 - -
Mepo6g02326 546 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 110 286 IPR014001 -
Mepo6g02326 546 SMART ultradead3 98 304 IPR014001 -
Mepo6g02326 546 Coils Coil 26 68 - -
Mepo6g02326 546 SMART DUF4217_3 461 524 IPR025313 -
Mepo6g02326 546 Pfam Helicase conserved C-terminal domain 316 420 IPR001650 -
Mepo6g02326 546 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 316 470 IPR001650 -
Mepo6g02326 546 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 79 107 IPR014014 GO:0003724
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02326 Mepo-Chr6 31394434 31402308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02326 79 439 Eukaryotic Initiation Factors Gene Family AT3G13920 31.421 1.40e-44 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02326 K13179 - gmx:100798290 840.491