Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02320 ATGGAATGGGTCCACTTGATCTTCCATGTAATCCTAGTATTCCATTCATACGCCATTGAAGCACAATCATTTGAATCAACAACAATATCAAGAGACAACTTAACTATCATGTTTGTTGGTTTTTTATCTGCCATAATTTTAATGGCCTTGTTTGCACTCTTACTCCGCCATTGCTCTTCCACCTCCTACAGTTACAACTGTAACCTAATCACCGATCTATTCCGCCGCGGATTCAACCGTCAAGTCATCGACAAGTGCCCTATCCTCGTTCACTCCACCGGTAAAACAACGTTTGAATGCGCTGTTTGCCTGAATGAGTTTCCACACAACGATAAATTAAGGTTGCTTCCGAAATGTTATCATGTTTTTCACCAAGATTGTATTGATGTTTGGTTACTCTCTCACATGAATTGTCCTATTTGTCGCTCCAAACTCACACCTAATGTTCCAGAATCAGAGCAACAACAAGAACATAGTAACACCATTATGGTGTCAGGGGAAGTAGCATTGGCTGATAATAATGTTACTGTCTCTCCATATTCATCGGCTCATTCATTGGTGGAACATTGCGCCATTTAA 579 0.4041 MEWVHLIFHVILVFHSYAIEAQSFESTTISRDNLTIMFVGFLSAIILMALFALLLRHCSSTSYSYNCNLITDLFRRGFNRQVIDKCPILVHSTGKTTFECAVCLNEFPHNDKLRLLPKCYHVFHQDCIDVWLLSHMNCPICRSKLTPNVPESEQQQEHSNTIMVSGEVALADNNVTVSPYSSAHSLVEHCAI 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02320 192 SUPERFAMILY RING/U-box 99 148 - -
Mepo6g02320 192 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 28 158 - -
Mepo6g02320 192 Pfam Ring finger domain 99 142 IPR001841 -
Mepo6g02320 192 FunFam E3 ubiquitin-protein ligase ATL6 68 148 - -
Mepo6g02320 192 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
Mepo6g02320 192 SMART ring_2 100 141 IPR001841 -
Mepo6g02320 192 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 149 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02320 Mepo-Chr6 31261896 31262474 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02320 34 153 Rapid Response to Elicitors AT3G05200 36.842 1.45e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02320 K10664 - cpap:110812438 116.701