Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02291 ATGGAGGAAATCAACAGCACAGCTATGAACGTATCATCAAGCACCAGCTGGTTATCTGATTTGGAAATGGACGAACACAATTTATTTACTGAGGAATGCAACCTGAATTTCCTTGATACTGATGTGGAAGAGTTTCTTTCACATGACATAGCTAATGTCTTCCAAGAACAAAACAACCAACAATGTTTAACTTCGGGGTTCACTTCCACAACTCTCAGCAACACATTTAGTGATGAAACACAGTTGGATTGTTTTGACTTCGATATTGATAAGACAATTATGGAGATGAAAACAATTGATCATAGTGAAAAAATCAATGAAACCTTTACACAAAAACTTTCTTCATCTTTTCAAGTTCAAATCCCATCTTTTGATAGCCCCCCAAATTCACCTACTACTAGCTCCCAACAATTTTCTGGCAAAAGAGTTTCAGTGTCTCCAACCGAATTGGAAAATAATAACCATTCAACAAAAGCCTCAAAAAGCAAAAGGTCTCGTTCTAATAATGGAGAGGATCATATCATGGCAGAAAGAAAGCGAAGAAAGAAACTCACCCAAAGCTTCATTGCTCTTGCAGCTCTTGTTCCCAACCTTAAAAAGATGGACAAATTTTCTGTACTGGTTGACACTATCAAATACATGAAAGAGCTTAAAAAGCGTTTGGAAGTTTTAGAAGAACAAAACAAGAGAATAAAATTAGAATCGTCTGTGGTTCTAACCAAACCAGACCATTGCAACGATGATGATGAGCGCAATGAAAGTGTTGTTGATTCAATATTTCAAGTGGAAGCAGAAGTGTTAGGGAAATATATGTTGATTCGGATCCAATGTAAAGAACACAAGGGACTTTTAGTTAAAATTATGGTGGAGATTCAAAGATTTCAACTATGTGTTGTCAATAGCAGTGTTTTACCCTTTGGAGATTCTATCCTTGATATTACTATCATTGCTCAGTTGGGTGAAGGCTACGACTTGAGCATAAAGGAACTTGTGAAGAACATACGCAAGGAAGCATTGAAGTTTATGTCATCGTAA 1035 0.3652 MEEINSTAMNVSSSTSWLSDLEMDEHNLFTEECNLNFLDTDVEEFLSHDIANVFQEQNNQQCLTSGFTSTTLSNTFSDETQLDCFDFDIDKTIMEMKTIDHSEKINETFTQKLSSSFQVQIPSFDSPPNSPTTSSQQFSGKRVSVSPTELENNNHSTKASKSKRSRSNNGEDHIMAERKRRKKLTQSFIALAALVPNLKKMDKFSVLVDTIKYMKELKKRLEVLEEQNKRIKLESSVVLTKPDHCNDDDERNESVVDSIFQVEAEVLGKYMLIRIQCKEHKGLLVKIMVEIQRFQLCVVNSSVLPFGDSILDITIIAQLGEGYDLSIKELVKNIRKEALKFMSS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02291 344 MobiDBLite consensus disorder prediction 120 155 - -
Mepo6g02291 344 Pfam Helix-loop-helix DNA-binding domain 173 217 IPR011598 GO:0046983
Mepo6g02291 344 Coils Coil 207 234 - -
Mepo6g02291 344 Gene3D - 153 234 IPR036638 GO:0046983
Mepo6g02291 344 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 168 217 IPR011598 GO:0046983
Mepo6g02291 344 PANTHER BHLH TRANSCRIPTION FACTOR 52 340 - -
Mepo6g02291 344 MobiDBLite consensus disorder prediction 120 174 - -
Mepo6g02291 344 SMART finulus 174 223 IPR011598 GO:0046983
Mepo6g02291 344 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 172 240 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02291 Mepo-Chr6 30248113 30251416 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02291 130 342 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 41.778 6.11e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo6g02291 HLH 1.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02291 - - mtr:25492647 381.333