Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02284 ATGGATGGGAACAAAGACGATGCATTGAAATCATTGAAAATCGGTAAAGAAGCTTTGGAAAAAGGCGATCGTAATCGCGCTTTGAAGTTTCTCAACAAAGCTCGCCGTCTCGACCCGACTCTTCCGATTGATGATCTGCTGTCCACCGTAAACAGCGATGCAGGTGATTATACCACATCAGCCGAAGAGCCGGCGAAGAATTCGTCCGATCAGCCTTCAATTCGTCGAAGGACTGGCTCCGCTCCGGTGCCAGGGCCTTCGTCGTCGTCCTCAGTGTCTTATACTGAGGAGCAAGTTTCAATTATAAGGGAAATTAAGAGGAAGAAGAATTATTATGATATTTTAGGGGTGGAGAAGAGTTGTACTGTCGATGATGTGCGAAAATCGTATAGGAAGCTGTCTTTGAAGGTTCATCCGGATAAGAATAAAGCTCCCGGAGCCGAGGAAGCGTTTAAATCGGTTTCCAAGGCTTTTCAGTGTCTTAGTAATGAGGAAAGTAAGAGGAAGTATGATGTTTCTGGAGAAGATGAAGTGGTTTATGAAAGGCGTGCTGCTGCGAGACCGGCTAGGGGATTTAATGGTTACTATGAGGCTGATGTTGATGCTGAAGAGATATTTAGGAATTTCTTCTTTGGAGGAATGGGAGGAATGGCGCCTGCTGCGAATTTCGGTGGGTTTAGTTTTGGTGGACCGGGGATGGCACATAGACAGGCTGCTGCTGATAATGGCTCCGGTGGATTCAATGTTCGTGCTTTGATTCAGTTACTTCCGGTGCTTCTCATTTTGCTTATTAACTTTTTGCCTTCGTCGGATCCGGTGTATGTTCTTTCGCAGAACTATCCTTATGAACACCGGCTTACTACACCTAAGAATGTTAACTACTATGTTAAGTCTACGAAGTTTGAACAAGATTATCCGTTGGGAAGCCGCGAACGAGCTACGATTGAGGAAAGGGTTGAGAGGGAATATTTTGGTATTCTTCGCCAGAATTGTCAATTTGAGATGCAGCGGCGCCAGTGGGGATATATCAGGGAAACGCCTCACTGTGATATGCTTCGGAAGTTTGATTTGGTCCGTTGA 1080 0.4556 MDGNKDDALKSLKIGKEALEKGDRNRALKFLNKARRLDPTLPIDDLLSTVNSDAGDYTTSAEEPAKNSSDQPSIRRRTGSAPVPGPSSSSSVSYTEEQVSIIREIKRKKNYYDILGVEKSCTVDDVRKSYRKLSLKVHPDKNKAPGAEEAFKSVSKAFQCLSNEESKRKYDVSGEDEVVYERRAAARPARGFNGYYEADVDAEEIFRNFFFGGMGGMAPAANFGGFSFGGPGMAHRQAAADNGSGGFNVRALIQLLPVLLILLINFLPSSDPVYVLSQNYPYEHRLTTPKNVNYYVKSTKFEQDYPLGSRERATIEERVEREYFGILRQNCQFEMQRRQWGYIRETPHCDMLRKFDLVR 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02284 359 Pfam Domain of unknown function (DUF1977) 268 339 IPR015399 -
Mepo6g02284 359 PANTHER AT29763P-RELATED 1 354 - -
Mepo6g02284 359 PRINTS DnaJ domain signature 130 145 IPR001623 -
Mepo6g02284 359 PRINTS DnaJ domain signature 112 130 IPR001623 -
Mepo6g02284 359 PRINTS DnaJ domain signature 146 166 IPR001623 -
Mepo6g02284 359 FunFam Chaperone protein dnaJ 49 106 223 - -
Mepo6g02284 359 SMART dnaj_3 109 166 IPR001623 -
Mepo6g02284 359 ProSitePatterns Nt-dnaJ domain signature. 151 170 IPR018253 -
Mepo6g02284 359 ProSiteProfiles TPR repeat profile. 8 41 IPR019734 GO:0005515
Mepo6g02284 359 ProSiteProfiles dnaJ domain profile. 110 174 IPR001623 -
Mepo6g02284 359 MobiDBLite consensus disorder prediction 54 96 - -
Mepo6g02284 359 CDD DnaJ 110 163 IPR001623 -
Mepo6g02284 359 SUPERFAMILY Chaperone J-domain 106 223 IPR036869 -
Mepo6g02284 359 Pfam DnaJ domain 110 171 IPR001623 -
Mepo6g02284 359 Gene3D DnaJ domain 106 221 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02284 Mepo-Chr6 30150099 30151720 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02284 105 182 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.585 3.37e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02284 K09518 - gmx:100793797 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g02284 6 30150099 30151720 Mepo6g02284 6 30150099 30151720 ECH