Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02248 ATGTTACCTTCAAATAGTAACTCTCACAATGAGAATTATGACCCTATTCCTTTTTCAACTGAACTTGAAAACAACTCAGCATCAATACTACAAAGCATTTATTGTGACCTACCTAATTCCCCTTTTAATTTGTCTTTTTTTCATCACTTCCCTTCAAACCTATTTGAAGATTATCAAAATAATCTCCTTGAACAAACCCCTCATGATTTTCTATTTCAATTTCAACCCCAATCTAATCTAGTTGAGCTTGAGACTGAGCTTGATGCTGTTGTTAGCATGAAAATGGATGCATCAATTAATGAAAGCAAGGACAAGGACAAGGACAGGGACAATAAGGTGGTACCTAAAAAAGGACCAAGCACAAGAAGAGATAGGCACAGCAAGATTAGAACAGCTAGAGGAATGAGAGATAGGAGAATGAGACTTTCAGTTCAAGTTGCTAAAAGGTTTTTCCGTTTACAAGACATGTTAGGCTTTGAAAAAGCTAGCAAAACAGTGGAGTGGTTACTAAATCAAGCAAAAGGTCAAATCAATCAAATAGCTGCAGCAAAGAGTAGTTATGTTTCTTCTTCAACTTATGAATATATGTCTAGTCCTGAAGATATTGCAGTCAACGAGATTACGCAAGAACAAAAGAAGAAAAAGAAGAAGCCTTTGGGTGTGAAGAGAATTATTAGGAAAAACCATTCCAGAATACATAATCCTCTTGCAAGGGAGTTGAGAGAAAAGGCAAGGGAAAGGGCAAGAGAGAGGACTAAAGATAAAAATATGAGAAGATCCATGGTTTTCAGTTCTCTACAAGAACATCTATTTGAAGAGTTTCAATCATTGAAGAAGGACTATATATAA 849 0.3569 MLPSNSNSHNENYDPIPFSTELENNSASILQSIYCDLPNSPFNLSFFHHFPSNLFEDYQNNLLEQTPHDFLFQFQPQSNLVELETELDAVVSMKMDASINESKDKDKDRDNKVVPKKGPSTRRDRHSKIRTARGMRDRRMRLSVQVAKRFFRLQDMLGFEKASKTVEWLLNQAKGQINQIAAAKSSYVSSSTYEYMSSPEDIAVNEITQEQKKKKKKPLGVKRIIRKNHSRIHNPLARELREKARERARERTKDKNMRRSMVFSSLQEHLFEEFQSLKKDYI 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02248 282 Pfam TCP family transcription factor 121 258 IPR017887 -
Mepo6g02248 282 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 103 259 IPR005333 GO:0003700
Mepo6g02248 282 MobiDBLite consensus disorder prediction 121 135 - -
Mepo6g02248 282 MobiDBLite consensus disorder prediction 100 136 - -
Mepo6g02248 282 MobiDBLite consensus disorder prediction 100 120 - -
Mepo6g02248 282 ProSiteProfiles R domain profile. 238 255 IPR017888 -
Mepo6g02248 282 ProSiteProfiles TCP domain profile. 122 180 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02248 Mepo-Chr6 29072323 29073344 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02248 44 252 TCP Transcription Factor Family AT3G18550 37.500 2.19e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mepo6g02248 TCP 1.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02248 - - gmx:100784394 156.762