Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02245 ATGTCATCAAGCACGCAAGTGGTTGTTCTAGACAACGGCGGAGGTCTAATAAAAGCCGGTTTCGGCGGCGAACGCGACCCATCAACCATACTCCCCAACTGTCTCTACAAACCCCTCACCTCCAAAAAATGGCTACACCCAAACCCTATCAACACCCCTTCCTCCTCCTCCTCCGAACAAGACCTCACCTCCGCCTCCGTCCGCCGCCCCATCGACCGCGGCTACCTAATCAACCCCGACCTCCAACGCGATATCTGGTCCCACCTCTTCACCTCTATCCTCCGCATCAACCCTTCTCAATCCTCTCTCCTTCTCACTCAACCCCTCTTCACTCTCCCTTCCATTCAACACTCCCTCCACCAACTCGTCTTCGAAGATTTCAACTTCTCCTCTCTCTACGTTGCTGATTCACCTTCCCTTGTTCATCTCTACGAAACCAGCCAACGTCCCAATGGCCTTCTCTCTAAAGCCCAATGTAGTCTCGTTGTTGATTCTGGTTTTTCCTTTACACACGCTTCGCCTGTCTTTCAGAACTTTACTCTTAACTACGCTGTTAAGCGTATCGATTTAGGTGGTAAAGCCTTGACCAATTACCTCAAGGAACTTATTTCCTTTCGTTCTGTTAATGTCATGGATGAAACTTTTATTATTGATGATGTTAAGGAGAATCTCTGCTTTGTTTCTGTTGACGTCGACAAACATCTTAACATTGCTAGAAAGAGTGGGAGAGACAATGTTTTCAAGTGTACGTATGTTCTTCCTGATGGTGTCACGCACACAAAAGGGTTTGTTAAATATCCCGAACAAGCAAGCAGGTATCTTGCTGAAGGTAAGGGAATGAAGGATGATATCGATGATCACCAGGAGATTTCTAAACAACAACCTCAGGACAACAGACAGAAAGTTGATTTGACAAAAAATGAATTTGATTTGACGAATGAACGGTTTCTTGTCCCCGAGATGATCTTCCGTCCAGCTGATTTGGGAATGAACCAGGCTGGTCTACCAGAATGCATTGTACGAGCAGTTAATGCCTGTCATCCACATCTTCATCCTGTACTCTATGAAAGCATTATTTTAACTGGTGGAAGCACCTTGTTTCCTCACTTTGCGGAGAGATTAGAGAAGGAGCTTCGGCCTCTAGTTCCTGATGACTATCGTGTGAAGATAGCTACACAAGAAGATCCCCTGCTAGGTGTTTGGCGTGGAGGATCTCTCCTGGCATCGAGTCCAGACTTTGATGCGATGTGTGTGACCAAGGCTGAGTATGAGGAGCTTGGTTCTGCTAGATGTCGCAAGAGATTTTTTCATTGA 1314 0.4635 MSSSTQVVVLDNGGGLIKAGFGGERDPSTILPNCLYKPLTSKKWLHPNPINTPSSSSSEQDLTSASVRRPIDRGYLINPDLQRDIWSHLFTSILRINPSQSSLLLTQPLFTLPSIQHSLHQLVFEDFNFSSLYVADSPSLVHLYETSQRPNGLLSKAQCSLVVDSGFSFTHASPVFQNFTLNYAVKRIDLGGKALTNYLKELISFRSVNVMDETFIIDDVKENLCFVSVDVDKHLNIARKSGRDNVFKCTYVLPDGVTHTKGFVKYPEQASRYLAEGKGMKDDIDDHQEISKQQPQDNRQKVDLTKNEFDLTNERFLVPEMIFRPADLGMNQAGLPECIVRAVNACHPHLHPVLYESIILTGGSTLFPHFAERLEKELRPLVPDDYRVKIATQEDPLLGVWRGGSLLASSPDFDAMCVTKAEYEELGSARCRKRFFH 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02245 437 FunFam Actin-related protein 6 135 195 - -
Mepo6g02245 437 Gene3D Actin; Chain A, domain 4 196 334 - -
Mepo6g02245 437 SUPERFAMILY Actin-like ATPase domain 158 436 IPR043129 -
Mepo6g02245 437 Gene3D - 135 402 - -
Mepo6g02245 437 SUPERFAMILY Actin-like ATPase domain 3 141 IPR043129 -
Mepo6g02245 437 Gene3D - 8 428 - -
Mepo6g02245 437 SMART actin_3 5 436 IPR004000 -
Mepo6g02245 437 Gene3D Actin; Chain A, domain 2 35 70 - -
Mepo6g02245 437 PANTHER ACTIN 7 428 IPR004000 -
Mepo6g02245 437 FunFam Putative actin-related protein 6 196 280 - -
Mepo6g02245 437 FunFam Putative actin-related protein 5 400 428 - -
Mepo6g02245 437 Pfam Actin 4 436 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02245 Mepo-Chr6 28593870 28597393 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02245 6 436 Cytoskeleton Gene Families AT1G49240 28.868 5.83e-62 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02245 K11662 - gmx:100819827 690.649