Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02244 ATGAATGAAAACTACAAAACCTCGCGTTCCCGCCCATTGCTTCTTCCTCCAATTTTCCCTTTCATTCAACTCACAGTTGTCCATCTGAAACCCTTTTCCTTGCTAGGGTTTCAGATTCCAACCATCACCATGCTAGATTCGGGGAACTTAGCGCCTTCTCCGCCTCTCTCGGCACCCTGCTCCATCACTGATGCTGCCCCCGCTGCCCCCAATGCCGCCTCTGGTTCTTCTGACAATGGCTCCTCTGCCTATGCTAGGGTTTTGAAGAGGACTCGGGGTTCTCTCCGTAAAACAGACAAACACAAGAGTTTGTGGGATCGCCTTACAGATCCTCAATCTCTTCCTTTTCTCGTTGCTGCTCCAAAGATGGTTGAATGTTGTTTCTGCCACCATGCTTTGTGTCCTGAGGATGAGCTTTTATGTTCTGTTCGTGGATGTGCTGCTCGCTATCATAAAGAATGTGCTAAACAAGCTGTTGGGGTTTCAAATCTCAAGAAATTCAAGTGTCCGCAACATGTGTGCTTCATTTGCAAGCAAAAGTTGAATTTGTTGCGGTGTGTCCGTTGCACGGTGGCTTTCCATACTAAATGTGCACCATGGCCAGAAGCCGTGATCCCTCTGGAAGATCATCCTGGGCAAGCTGTTTGTTGGAGACATTCTGATTGGCGCCTGGACAAAAAGGAACAGCCTGATACTTCAACAAGTGACATTTCGGAAGTATTTTGTCGTTTGCCTCTTCCTTTTACTAATGAGGAATTCAAGATTGACTTCACTTGGAAAGACATGGACAATAAGATGGAGCCACCGCCATATACACACATAAGGCGCAATATGTACCTAGTGAAGAAAAAGCGTAGTGATGTAGATGATGATGTGGGGTGCACCAACTGCAGTTCTACTTGCTCTAATGATTGTGTATGCAGGGTTCAATGCATAAGCTGCTCAAAGGCTTGTCGGTGCTCTAAAAATTGTAGTAATCGGCCATTTCGAAGGGAAAAACAAATCAGGATTGTCAAGACTGAGTTTTGTGGATGGGGAGTTGAGGCTGTTGAAACAATTGAGAAAGGAGAGTTTATAATTGAGTATATTGGAGAAGTGATTGATGATGCTTTATGTGAACAAAGGCTTTGGGACATGAAATATAAGGGTGTGCAGAATTTTTACATGTGTGAGATTCGGAAAGACTTCACAATAGATGCAACTTTCAAAGGAAATTCATCACGCTTTTTAAACCATAGCTGTGATCCCAATTGTGTTTTGGAGAAGTGGCAAGTAGATGGTGAAACGCGCATTGGTGTATTTGCTGGTCGTTCAATAGAAGTTGGAGAGCCGTTGACATACGATTACAGATTTGTGCAATTTGGTGCAGAGGTTAAGTGCCGCTGCGGTTCCCCAAAATGTCAAGGATTTCTAGGTTCAAAAAAGAAAATTGGCAAAGTAAACCTCTGTTGGGGCGCAAAACGTAAGCGAACTTCTTGCCCTAGGGCAGCAAATGCTGCTGATTTGCCTAAGTATTATATGTACTTATCACAGTGA 1536 0.4414 MNENYKTSRSRPLLLPPIFPFIQLTVVHLKPFSLLGFQIPTITMLDSGNLAPSPPLSAPCSITDAAPAAPNAASGSSDNGSSAYARVLKRTRGSLRKTDKHKSLWDRLTDPQSLPFLVAAPKMVECCFCHHALCPEDELLCSVRGCAARYHKECAKQAVGVSNLKKFKCPQHVCFICKQKLNLLRCVRCTVAFHTKCAPWPEAVIPLEDHPGQAVCWRHSDWRLDKKEQPDTSTSDISEVFCRLPLPFTNEEFKIDFTWKDMDNKMEPPPYTHIRRNMYLVKKKRSDVDDDVGCTNCSSTCSNDCVCRVQCISCSKACRCSKNCSNRPFRREKQIRIVKTEFCGWGVEAVETIEKGEFIIEYIGEVIDDALCEQRLWDMKYKGVQNFYMCEIRKDFTIDATFKGNSSRFLNHSCDPNCVLEKWQVDGETRIGVFAGRSIEVGEPLTYDYRFVQFGAEVKCRCGSPKCQGFLGSKKKIGKVNLCWGAKRKRTSCPRAANAADLPKYYMYLSQ 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02244 511 SUPERFAMILY SET domain 243 462 IPR046341 -
Mepo6g02244 511 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 221 IPR013083 -
Mepo6g02244 511 Gene3D SET domain 248 490 IPR046341 -
Mepo6g02244 511 ProSiteProfiles AWS domain profile. 290 333 IPR006560 GO:0005634|GO:0042054
Mepo6g02244 511 SUPERFAMILY FYVE/PHD zinc finger 172 221 IPR011011 -
Mepo6g02244 511 PANTHER SET DOMAIN PROTEINS 80 495 - -
Mepo6g02244 511 SMART PostSET_3 456 472 IPR003616 -
Mepo6g02244 511 FunFam Histone-lysine N-methyltransferase 248 483 - -
Mepo6g02244 511 Pfam SET domain 344 449 IPR001214 GO:0005515
Mepo6g02244 511 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 503 IPR025787 -
Mepo6g02244 511 ProSiteProfiles Post-SET domain profile. 456 472 IPR003616 -
Mepo6g02244 511 CDD SET_ASHR3-like 334 472 - -
Mepo6g02244 511 ProSiteProfiles SET domain profile. 333 450 IPR001214 GO:0005515
Mepo6g02244 511 SMART PHD_3 125 173 IPR001965 -
Mepo6g02244 511 SMART PHD_3 174 220 IPR001965 -
Mepo6g02244 511 SMART set_7 333 456 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02244 Mepo-Chr6 28567608 28576574 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02244 314 471 C2H2 Transcription Factor Family AT2G23740 34.078 1.23e-21 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo6g02244 SET 8.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02244 - - tpra:123884811 736.873