Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02199 ATGGCAGGAATGCTTCCAGGAGTTGAATCAGCTAGAAGAAGACGTGTCCATAAGTCTGGAGGATTTTCTGATTCACCATCTTTTTCTTCTCATATCACCTCAAGACGCTCTTCTTTTTGTTTGTATGCAAGTAACCATGAATCTCGTATTTCCTCATCTTCTTCAACGCAAAGAAATATATTATACCAGTCACACCAAGATGAGAATATGGTAGGAGCAGCTAGAGCAGCCAAACAAAGATTGGATGACAAATTCAGATCACAAAGGGTATCAGAAAACATAAGGAAAAAGAACATGAAGTGTGTGGAAGGTAGAAAAGAAAGCATAGAAGAGTTACAAACTGAGGTATATGGGACAAAGAAAAGTGGTCCAAGGAAGTTCAGTTGGAGCAAATTGAGCTGGAAAGCATCAGAACAAGAGGATTGTGCTGTGTGTTTGGAATCATTTAAGATTGGAGACAAATTGATTCCTTTACCTTGTGCACACAAGTTCCATTCCACATGCTTGAAGCCTTGGTTAGAAAATAATTCACACTGTCCATGTTGTAGAACTACCATTCTTTCCCTCTAG 570 0.3912 MAGMLPGVESARRRRVHKSGGFSDSPSFSSHITSRRSSFCLYASNHESRISSSSSTQRNILYQSHQDENMVGAARAAKQRLDDKFRSQRVSENIRKKNMKCVEGRKESIEELQTEVYGTKKSGPRKFSWSKLSWKASEQEDCAVCLESFKIGDKLIPLPCAHKFHSTCLKPWLENNSHCPCCRTTILSL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02199 189 PANTHER SI:CH211-59O9.10 29 187 - -
Mepo6g02199 189 FunFam Zinc finger family protein 116 188 - -
Mepo6g02199 189 SMART ring_2 142 182 IPR001841 -
Mepo6g02199 189 MobiDBLite consensus disorder prediction 1 32 - -
Mepo6g02199 189 Pfam Ring finger domain 141 183 IPR001841 -
Mepo6g02199 189 SUPERFAMILY RING/U-box 131 187 - -
Mepo6g02199 189 ProSiteProfiles Zinc finger RING-type profile. 142 183 IPR001841 -
Mepo6g02199 189 CDD RING-H2_PA-TM-RING 141 183 - -
Mepo6g02199 189 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 188 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02199 Mepo-Chr6 26869411 26870650 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02199 1 86 C3H Transcription Factor Family AT2G15580 45.263 9.24e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02199 - - gmx:100527583 266.929