Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02188 ATGATGTTGATAACCGTAAAAGTAGCTTCCCCTTCTCCCCGGTGGTGTGTCCGGCTTAATAATCGTCCTCTCATACCAAAACCATATTCTTCTTCTTCTTCCATTTGCAGAGCCACTCTCTCTGTTCGGAGAATATCTACCACTCAACCTCATCTCTCTACGAGCTATGACGTAGCGAATTTCGACCCATTAGGTATTAACTCTTCTTCTTCTACATGGAAAAATATTATGAGTTTGTTTGAGAGCTCAGAAAAACCTCGAGGAGGAGTAGCAGCTGCAATAGAGGATAGTTCAATTGATTTTGGTGACTTCTTCAAAGGTCCTCTGCCAGGGAAGTTTCTGAAGCTTTTAGGGTTTCTTGTATTGTCAAGGCTTGGTGTGTATATACCTTTAGGTGGAGTTAACAGAGAGGCTTTTCTTGGAAATTTGGATCAGAATAGTTTGTTAAGCACTCTAGACTCCTTTTCTGGTGGTGGTATTGGTAGACTTGGTATATGCTCTCTTGGTATTGTTCCTTTCATCAATGCACAGATTGTTTTTCAGCTTCTTGCTCAAGTATATCCCAAGTTGCAAGATCTTCAGAAAAGAGAAGGTGAGGCTGGAAGAAAGAAAATTCTTCAGTACACTCGATATGCTTCTGTTGGATTCGCCATTGTACAGGCTATTGGCCAAGTTCTTTTCCTGCGTCCCTATGTAAATGACTTTACAACAGAGTGGGCTCTTACTTCAGTTATCTTATTGACACTTGGCTCCGTGATTACAACGTACATTGGGGAGCAAATTACTGACCTGAAACTTGGGAATGGAACCTCTCTTTTGATATTCACAAACATTATCTCTTACTTGCCAGCTTCTTTTGGTCGGACATTTGCACAAGCATTTAATGATGCCAACTATGTCGGACTTGTTACCATCATCGTGTCCTTCTTTCTGTTGGTAGTTGGAATTGTCTATGTTCAGGAAGCAGAGAGAAAAATTCCTATTAACTACGCGTCTAGATTCACCAGCAAAAGCGGTGGACTTGAAAAATCTGCTTACCTACCGTTTAAGGTCAATAGTTCTGGGGTAATGCCTATCATATTTTCTACATCATCGTTAGCTCTTCCTGGTACTTTAGCACGTTTCACTGGTTTAAGTGCACTAAAAAATGCTGCAGTAGCTTTGAATCCAGGAGGCTCCTTCTATCTTCCATTTAACATACTTTTGATAGCCTTCTTCAACTACTATTACACTTTCCTACAACTGGATCCAGATGATGTGAGCGAACAATTGAAACGTCAAGGTGCTTCAATTCCACTTGTCAGACCAGGCAGAAGTACAGCTACATTTATTAAAACAGTTCTTGGTCGAATATCAGTTCTGGGTTCAACATTTTTGGCAATCTTGGCTGCTGGACCTGCAATTGTTGAGCAGACTGCACACTTGACTGCATTCCGGGGATTTGCTGGAACATCTATTCTTATTCTTGTTGGTTGTGCAACAGACACTGCAAGAAAAGTTCGAGCTGAGATTATATCCCAGAAGTACAAAAACATAGAGTTATATGACTTTGATAAGTATTGA 1563 0.4063 MMLITVKVASPSPRWCVRLNNRPLIPKPYSSSSSICRATLSVRRISTTQPHLSTSYDVANFDPLGINSSSSTWKNIMSLFESSEKPRGGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLVLSRLGVYIPLGGVNREAFLGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLFLRPYVNDFTTEWALTSVILLTLGSVITTYIGEQITDLKLGNGTSLLIFTNIISYLPASFGRTFAQAFNDANYVGLVTIIVSFFLLVVGIVYVQEAERKIPINYASRFTSKSGGLEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSALKNAAVALNPGGSFYLPFNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGRSTATFIKTVLGRISVLGSTFLAILAAGPAIVEQTAHLTAFRGFAGTSILILVGCATDTARKVRAEIISQKYKNIELYDFDKY 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02188 520 ProSitePatterns Protein secY signature 1. 164 183 IPR030659 -
Mepo6g02188 520 Pfam SecY 165 496 IPR002208 GO:0015031|GO:0016020
Mepo6g02188 520 NCBIfam preprotein translocase subunit SecY 112 509 IPR002208 GO:0015031|GO:0016020
Mepo6g02188 520 Hamap Protein translocase subunit SecY [secY]. 101 513 IPR026593 -
Mepo6g02188 520 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 105 512 IPR002208 GO:0015031|GO:0016020
Mepo6g02188 520 Gene3D SecY subunit domain 104 509 IPR023201 -
Mepo6g02188 520 FunFam Preprotein translocase subunit SECY, chloroplastic 104 509 - -
Mepo6g02188 520 SUPERFAMILY Preprotein translocase SecY subunit 105 503 IPR023201 -
Mepo6g02188 520 PIRSF SecY_Sec61alpha 88 520 IPR002208 GO:0015031|GO:0016020
Mepo6g02188 520 PRINTS Preprotein translocase SecY subunit signature 448 466 - -
Mepo6g02188 520 PRINTS Preprotein translocase SecY subunit signature 163 183 - -
Mepo6g02188 520 PRINTS Preprotein translocase SecY subunit signature 263 286 - -
Mepo6g02188 520 PRINTS Preprotein translocase SecY subunit signature 354 373 - -
Mepo6g02188 520 PRINTS Preprotein translocase SecY subunit signature 482 500 - -
Mepo6g02188 520 PRINTS Preprotein translocase SecY subunit signature 205 228 - -
Mepo6g02188 520 PRINTS Preprotein translocase SecY subunit signature 113 131 - -
Mepo6g02188 520 PRINTS Preprotein translocase SecY subunit signature 237 262 - -
Mepo6g02188 520 PRINTS Preprotein translocase SecY subunit signature 393 415 - -
Mepo6g02188 520 ProSitePatterns Protein secY signature 2. 256 273 IPR030659 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02188 53 520 Chloroplast and Mitochondria Gene Families AT2G18710 82.851 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02188 K10956 - gmx:100810430 810.061