Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02178 ATGGCTGTTGTAGAGAATCAGAGGAGAGATGAAGATGGGGTTGTTGATCGTTTTCCTGTTGGTATGCGTGTTCTTGCTGTTGATGACAACCCAACTTGTCTCAAAGTCTTGGCTAAACTGCTTGGTGAATGCAAATATCATGTTACTACAGCTACTAATGGATTTGATGCACTAAAAATGTTGAGGGAAAACAGAAAGAACTTTGACCTGGTTATCAGTGATGTGGCTATGCCTGACATGGATGGATTTAAGTTGCTTGAGTTGGTTGGACTTGAAATGGACTTACCTGTCATCATGTTGTCGGGATACAGTGATACAAGTATGGTATTCAAGGGTGTTACCCATGGTGCATGTGACTATCTGGTGAAACCTGTTCGGCTTGAAGAGCTTAGAAACATATGGCAACATGTAGTCCGAAAGAAAAAAACTTATTCCAAGGATGATAACAAGGCTTCCAATGAGAATAAGGTCCCTAATATTTCTGGGGGAAGCAATCAAAACATATTGGAGAACAGTGCTGATCAGAATAAAAGGCTCGGTAAAAGAAGGAAGGAGCAAGATGAGGAGGAGAATGAAGAAGAAGAAGATGAAGAGAGTGAAGGGAGTGGAGATGGAGAAGAGGATGACCCGTCATCACAGAAGAAACCTCGTGTGGTTTGGTCTCCTGAATTGCATAAGAAATTTGTCTGTGCTGTTAATCAACTTGGTGCAGACAGGGCTGTTCCGAAGAAAATACTTGAGCTGATGAATATTGAAGGGATTACCAGAGAAAATGTGGCAAGCCATTTGCAGAAATATAGACTATATCTGAAAAAGGCAACTCCCCATGATACTAACATGGTTGCTGGACTGGGCGGTGGTAATGATTCTTACCTTCGAATGAGAGGAATAGATGGATATGCAGACTTTTGCACCTCAACCAGATCTGGAAGGATCGCAAGCACCACATTGCCGTCATATGCACCGAGCGGAGTTTTCGGTAGGCTGAATTCCCCAGCCGGCTTGAACATGAGAGGAATTAATTCTTCAACACTGATTCAGACTGTTCAGTCTCAAAACATCAACAGCTCCTGGATTCCTGCAAATCAAAGCTCAAGCTTATTACATGGCGTTCCATCCGAGCTTAACCAATCTAAGCTAAACAATAGTGCAACTGGTATATCGCAGTTAAATCAAATAGATTCCACTGGATTTGTAGCTGCTTCAGACTTTCACGATAGTAGGGCTATTAACAATTCTAATCAAGTCTCAAACCATCATCTATTGTTGCAAGGAAATTCACAACAGACACACAATGCAGGGTCATTCAGAAATGAGTCTTCTGTTGGATCTGCTTCCTTGGGAAACAAAAACATTACCATTTGCGGTTCTTCTAACTGGCAAAGTCAAGCTCAGTTACCTAAATTTCCTGCTAGTTCTTTGCCGGTATGCAAGTCTTTCAATAATGACCAACTGCCTCTCATTAGCGTTACTGCTTATAACCAAAGCCCTCTTATCGCTAACAGTCCAGTTGACTTTTCATCTGGAAACACAATCACTGTTGCTTTGGAGGAAGCCAGAAATGTGCCGAGATGCCAAGAAGATGGCTTGATTGGGAATTTTATACAGCCTTCAAGTTATGCTCCGCGACAAAGCTGGGCAGAAAATAAACCGGATTACAGCCAAAACACGAGTCGTCCCTTCAATCCTGTGAACTCACAGGTTTGTTCCAGTAGGGCATTGGCAAATTCTGCGTCTCACAATATCAACCAAAGTAAAACAGTCTGCAGCAATAGAGTTGATGCATCTTTTGTTGATCAAGTATATGGCGCTTCCACGTCAGTTGCTCGGTACCCCGAAGTACAAGTCAACTCGAATGATGCCTACAAGTTAGAGAAGATGAGGTCCCAAGTTGGATATGTTGAGGGTTTTGGAACCTTAGAAGACATAATGGGTGCAATAGTCAAAAGGGAGCAAATTGAGATGACATTGATGGATGGAGAAATGGGCTATGATGCATACCCTGTTGGATCATGTATTTGA 2022 0.4228 MAVVENQRRDEDGVVDRFPVGMRVLAVDDNPTCLKVLAKLLGECKYHVTTATNGFDALKMLRENRKNFDLVISDVAMPDMDGFKLLELVGLEMDLPVIMLSGYSDTSMVFKGVTHGACDYLVKPVRLEELRNIWQHVVRKKKTYSKDDNKASNENKVPNISGGSNQNILENSADQNKRLGKRRKEQDEEENEEEEDEESEGSGDGEEDDPSSQKKPRVVWSPELHKKFVCAVNQLGADRAVPKKILELMNIEGITRENVASHLQKYRLYLKKATPHDTNMVAGLGGGNDSYLRMRGIDGYADFCTSTRSGRIASTTLPSYAPSGVFGRLNSPAGLNMRGINSSTLIQTVQSQNINSSWIPANQSSSLLHGVPSELNQSKLNNSATGISQLNQIDSTGFVAASDFHDSRAINNSNQVSNHHLLLQGNSQQTHNAGSFRNESSVGSASLGNKNITICGSSNWQSQAQLPKFPASSLPVCKSFNNDQLPLISVTAYNQSPLIANSPVDFSSGNTITVALEEARNVPRCQEDGLIGNFIQPSSYAPRQSWAENKPDYSQNTSRPFNPVNSQVCSSRALANSASHNINQSKTVCSNRVDASFVDQVYGASTSVARYPEVQVNSNDAYKLEKMRSQVGYVEGFGTLEDIMGAIVKREQIEMTLMDGEMGYDAYPVGSCI 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02178 673 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 396 IPR045279 GO:0009736
Mepo6g02178 673 FunFam Two-component response regulator 211 274 - -
Mepo6g02178 673 CDD REC_typeB_ARR-like 24 138 - -
Mepo6g02178 673 MobiDBLite consensus disorder prediction 144 218 - -
Mepo6g02178 673 Pfam Myb-like DNA-binding domain 217 267 IPR001005 -
Mepo6g02178 673 SUPERFAMILY Homeodomain-like 213 272 IPR009057 -
Mepo6g02178 673 NCBIfam myb-like DNA-binding domain, SHAQKYF class 215 268 IPR006447 GO:0003677
Mepo6g02178 673 Gene3D - 22 211 - -
Mepo6g02178 673 Pfam Response regulator receiver domain 24 133 IPR001789 GO:0000160
Mepo6g02178 673 PIRSF RR_ARR_type-B 1 673 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mepo6g02178 673 Gene3D - 212 273 - -
Mepo6g02178 673 MobiDBLite consensus disorder prediction 189 206 - -
Mepo6g02178 673 MobiDBLite consensus disorder prediction 154 174 - -
Mepo6g02178 673 Coils Coil 169 197 - -
Mepo6g02178 673 ProSiteProfiles Response regulatory domain profile. 23 138 IPR001789 GO:0000160
Mepo6g02178 673 SMART REC_2 22 134 IPR001789 GO:0000160
Mepo6g02178 673 SUPERFAMILY CheY-like 21 145 IPR011006 -
Mepo6g02178 673 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 212 271 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02178 Mepo-Chr6 26499322 26503742 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02178 14 385 Response Regulator Gene Family AT2G25180 49.086 8.63e-108 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mepo6g02178 Response_reg 3e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02178 K14491 - gmx:100776075 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g02178 6 26499322 26503742 Mepo6g02178 6 26499322 26503742 ECH