Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02121 ATGACGTCACGTTCGTCGAATAGTAGCGGAGGAAGCAGCAACGGTGGACGTGCGAAGGCGGGAAAGTATGAGCTGGGTAGGACGTTAGGTGAAGGTAATTTCGCAAAGGTGAAGTTTGCTAGACACGTTGAAACTGGTGATCATGTTGCTATCAAGATACTTGATAAGGAGAAAATTCTCAAGCATAAAATGATTCGTCAGATAAAACAAGAAATATCAACAATGAAACTGATTAGACACCCAAATGTCATACGCATGCATGAGGTAATAGCTAACAGGTCAAAGATATTCATCGTAATGGAACTCGTGACTGGTGGGGAGCTGTTTGATAAAATTGCTCGCAGTGGGAGATTGAAAGAAGATGAAGCAAGAAAATATTTTCAGCAGCTTATATGTGCTGTGGATTACTGTCATAGTAGAGGTGTTTGCCACAGAGACCTAAAGCCTGAGAATTTGTTGCTGGATGCTAATGGAACGCTCAAAGTATCGGATTTTGGATTGAGTGCATTGCCTCAACAAGTTCGGGAAGATGGGCTACTTCACACAACATGTGGTACACCAAATTATGTCGCTCCAGAGGTGATCCAAAACAAAGGGTATGATGGTGCAATTGCAGATCTCTGGTCATGTGGTGTTATTCTTTTTGTTTTAATGGCTGGCTATTTGCCCTTTGAAGAAGACAATCTTGTAGCTTTATATAAAAAGATTTTCAAGGCTGACTTTGCCTGCCCTCCATGGTTCTCATCAAGTGCGAAGAAACTAATCAAAAGAATTCTTGATCCCAGTCCTATCACACGGATTAAAATTGCCGAGGTCATTGAAAATGAGTGGTTCAAGAAGGGATATAAACCTCCTGTGTTTGAACAGGCTGATGTTAGTCTTGATGATGTAAATTCTATTTTCAATGGTTATATGGATTCAGATAATATTGTTGTTGAGAGGCAAGAAGAGGGGCCTGTTGCACCTGTGACCATGAATGCGTTTGAACTTATCTCTAAGTCTCAGGGCCTCAACCTTAGCAGTCTTTTCGAGAAGCAAATGGGACTTGTTAAAAGGGAAACGAGATTCACATCCAAATGTTCAGCGAATGAAATAATTTCAAAAATCGAGAAAACTGCAGGACCTCTGGGTTTTGATGTCAAGAAGAACAACTGCAAGTTAAGGATTTATGGGGAAAAGACTGGACGGAAAGGTCATCTATCTGTAGCTACTGAGATCTTGGAGGTGGCCCCTTCAATTTACATGGTTGAGATGCGAAAATCTGAAGGAGATACTCTGGAATTTCACAAGTTCTACAAAAGTATAACTACTGGGCTGAAAGATATTGTTTGGAGAGCAGATCCTATTGCTGAAGAAAATGGTGCCAGTACCTCAAAATAA 1380 0.408 MTSRSSNSSGGSSNGGRAKAGKYELGRTLGEGNFAKVKFARHVETGDHVAIKILDKEKILKHKMIRQIKQEISTMKLIRHPNVIRMHEVIANRSKIFIVMELVTGGELFDKIARSGRLKEDEARKYFQQLICAVDYCHSRGVCHRDLKPENLLLDANGTLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVIQNKGYDGAIADLWSCGVILFVLMAGYLPFEEDNLVALYKKIFKADFACPPWFSSSAKKLIKRILDPSPITRIKIAEVIENEWFKKGYKPPVFEQADVSLDDVNSIFNGYMDSDNIVVERQEEGPVAPVTMNAFELISKSQGLNLSSLFEKQMGLVKRETRFTSKCSANEIISKIEKTAGPLGFDVKKNNCKLRIYGEKTGRKGHLSVATEILEVAPSIYMVEMRKSEGDTLEFHKFYKSITTGLKDIVWRADPIAEENGASTSK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02121 459 MobiDBLite consensus disorder prediction 1 15 - -
Mepo6g02121 459 MobiDBLite consensus disorder prediction 1 20 - -
Mepo6g02121 459 CDD STKc_SnRK3 22 277 - -
Mepo6g02121 459 Gene3D Phosphorylase Kinase; domain 1 12 102 - -
Mepo6g02121 459 Pfam NAF domain 322 382 IPR004041 GO:0007165
Mepo6g02121 459 FunFam Non-specific serine/threonine protein kinase 319 445 - -
Mepo6g02121 459 CDD CIPK_C 326 434 - -
Mepo6g02121 459 ProSiteProfiles Protein kinase domain profile. 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02121 459 SMART serkin_6 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02121 459 ProSiteProfiles NAF domain profile. 320 344 IPR018451 GO:0007165
Mepo6g02121 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Mepo6g02121 459 FunFam Non-specific serine/threonine protein kinase 14 102 - -
Mepo6g02121 459 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Mepo6g02121 459 Gene3D Transferase(Phosphotransferase) domain 1 103 285 - -
Mepo6g02121 459 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 20 434 - -
Mepo6g02121 459 Pfam Protein kinase domain 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g02121 459 FunFam Non-specific serine/threonine protein kinase 16 318 - -
Mepo6g02121 459 Gene3D Kinase associated domain 1, KA1 320 445 - -
Mepo6g02121 459 SUPERFAMILY Protein kinase-like (PK-like) 21 293 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02121 Mepo-Chr6 25256933 25264463 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02121 6 453 CBL-interacting serine-threonine protein kinases AT1G01140 65.859 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mepo6g02121 Pkinase 8.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02121 - - gmx:100788746 779.63