Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02120 ATGCATCTTTCTCTACACACTCTTTTACCCACCAACACCATGTTCCCAGCTGCTAGAACCATAGCTCTACACTCATCTTCCCTATGCTCAGTCTCATCTGATAAACCATCATCACCTCCTTCAACAAATTTAACTCCCAAACCCAAAAGTCTCCTTCAAAACCATCCACTTTACACACCAACTCATGAAAAACTCTCACTTCAATTCAAAGAAAAAATTCTTTGTCTTGAAGTAATGGGCATTGATTCAGGTAAAGCACTCTCCCAAAATCCTAACCTTCATACAGCTACCTTAGAATCCATTCATTCCATTATCACCTTTCTTGTTACCAAAGGTATCCAACATAAAGACCTTCCAAGAATCTTTGGCATGTGTCCTAAGATTCTCACTTCAAGCATCAAAAATGATCTTAACCCAGTTTTTGATTTTCTCATACATGATCTTAAAGTGCCTGATCATAGCTTTAGAAAAGTTATCAAAAAGTGTCCAAGAATGCTTACTTCTAGTGTGGTGGATCAGCTTAAACCAGCTTTGTTTTATCTTAACAGATTAGGATTAAGAGATTTAGAAGCATTGGCTTATCAAGATTGTGTTCTTTTGGTTTCCAATGTTGAAAGGACACTTATTCCTAAACTTAAGCATTTGGAGAGTATGGGATTTACTAAAGAAGAGGCTAGGTGTATGGTGTTGAGGTGTCCTGCATTGTTGACCTTTAGTATTGAGAATAATTTCCAGCCTAAATTTGAGTATTTTACTGTGGAAATGAAGGGGAAATTGGAGGAGTTGAAAGAGTTTCCTCAGTATTTCTCTTTTAGTTTGGAGAATAGGATAAAGGTTAGACACATGGAGGTTGTGGAAAGTGGGATCAATTTGCCTTTGTCATTGATGCTTAAAAGTACTGATGATGAATTTAGGGAGTTGATAAAGAAAGGGGCTGGATGA 942 0.3715 MHLSLHTLLPTNTMFPAARTIALHSSSLCSVSSDKPSSPPSTNLTPKPKSLLQNHPLYTPTHEKLSLQFKEKILCLEVMGIDSGKALSQNPNLHTATLESIHSIITFLVTKGIQHKDLPRIFGMCPKILTSSIKNDLNPVFDFLIHDLKVPDHSFRKVIKKCPRMLTSSVVDQLKPALFYLNRLGLRDLEALAYQDCVLLVSNVERTLIPKLKHLESMGFTKEEARCMVLRCPALLTFSIENNFQPKFEYFTVEMKGKLEELKEFPQYFSFSLENRIKVRHMEVVESGINLPLSLMLKSTDDEFRELIKKGAG 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02120 313 MobiDBLite consensus disorder prediction 32 55 - -
Mepo6g02120 313 SMART mt_12 226 258 IPR003690 GO:0003690|GO:0006355
Mepo6g02120 313 SMART mt_12 119 151 IPR003690 GO:0003690|GO:0006355
Mepo6g02120 313 SMART mt_12 259 290 IPR003690 GO:0003690|GO:0006355
Mepo6g02120 313 SMART mt_12 190 221 IPR003690 GO:0003690|GO:0006355
Mepo6g02120 313 SMART mt_12 156 187 IPR003690 GO:0003690|GO:0006355
Mepo6g02120 313 SMART mt_12 84 114 IPR003690 GO:0003690|GO:0006355
Mepo6g02120 313 PANTHER CGI-12 PROTEIN-RELATED 36 308 IPR003690 GO:0003690|GO:0006355
Mepo6g02120 313 FunFam Transcription termination factor MTEF1, chloroplastic 144 312 - -
Mepo6g02120 313 Pfam mTERF 199 304 IPR003690 GO:0003690|GO:0006355
Mepo6g02120 313 Pfam mTERF 85 187 IPR003690 GO:0003690|GO:0006355
Mepo6g02120 313 Gene3D Transcription termination factor 3, mitochondrial 131 310 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02120 Mepo-Chr6 25254678 25256185 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mepo6g02120 mTERF 2.1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02120 K15032 - gmx:100788221 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g02120 6 25254678 25256185 Mepo6g02120 6 25254678 25256185 ECH